Query= MSMg01no452_b05.b1 MSMg01no452_b05.b1 CHROMAT_FILE:
MSMg01no452_b05.b1 PHD_FILE: MSMg01no452_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:32 2005
(447 letters)
>mm_chr11_98864523_98865369
Length = 847
Score = 851 bits (440), Expect = 0.0
Identities = 443/444 (99%)
Strand = Plus / Plus
Query: 4 ggaattcataaggatctcctcatctctgtctcccgagtgctaggattatgataataacag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcataaggatctcctcatctctgtctcccgagtgctaggattatgataataacag 263
Query: 64 ttttgaaatattatctcttacaaagtaatgcataccatagagttgcaagtgagactactc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttgaaatattatctcttacaaagtaatgcataccatagagttgcaagtgagactactc 323
Query: 124 tggagtttgaagactttgtgtaggccgactctctctgcctctgccagtttttcttcagtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tggagtttgaagactttgtgtaggccgactctctctgcctctgccagtttttcttcagtc 383
Query: 184 atctttatgacaaacttcacagtggtatctgtatggtattccctatagtctgttattaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atctttatgacaaacttcacagtggtatctgtatggtattccctatagtctgttattaga 443
Query: 244 gagggtgtcttctcagttccattcaacatgggttctagaacctgttctttatatgtctaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagggtgtcttctcagttccattcaacatgggttctagaacctgttctttatatgtctaa 503
Query: 304 aaaacaagaacaaaaaccaaaacacaataatcctttggcaaggagtctcttaaacagtca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaaacaagaacaaaaaccaaaacacaataatcctttggcaaggagtctcttaaacagtca 563
Query: 364 ataacaaaaacaatatttttctcttgaaaaactaagaagtcaatagttacttacctgagt 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 564 ataacaaaaacaatatttttctcttaaaaaactaagaagtcaatagttacttacctgagt 623
Query: 424 ccacgttcggatgggaagctctga 447
||||||||||||||||||||||||
Sbjct: 624 ccacgttcggatgggaagctctga 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no452_b05.g1 MSMg01no452_b05.g1 CHROMAT_FILE:
MSMg01no452_b05.g1 PHD_FILE: MSMg01no452_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:22:32 2005
(571 letters)
>mm_chr11_98994588_98995558
Length = 971
Score = 1015 bits (525), Expect = 0.0
Identities = 566/595 (95%), Gaps = 24/595 (4%)
Strand = Plus / Minus
Query: 1 ttacacggggaaggcatagatcaccaggaagtctgccaggcatccctgttgatttgcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ttacacggggaaggcatagatcaccaggaagtctgccaggcatccctgttgatttgcaga 754
Query: 61 gataaaaactgagccactgagggatgaaatgaccaacgagcaccagaggtagtgcctgtg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 753 gataaaaactgagccactgagggatgaaatgaccagcgagcaccagaggtagtgcctgtg 694
Query: 121 gcttttcagatacaccacctctaggatacagtgaccagatacaacacggcctgagttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 gcttttcagatacaccacctctaggatacagtgaccagatacaacacggcctgagttcac 634
Query: 181 ctccaccacccccacccccaacaaccaccacccccacccccaaccaccaccccaccaccc 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 633 ctccaccacccccacccccaaccaccaccacccccacccccaaccaccaccccaccaccc 574
Query: 241 gcacagctgcttcccatttgaggggaggaagaggaatagcagcaggccggctggaggccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 573 gcacagctgcttcccatttgaggggaggaagaggaatagcagcaggccggctggaggacg 514
Query: 301 gccaggaggggaggtctgaccaccaggcgcccccttgacaggcacgaagcagcagaga-- 358
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 513 gccaggaggggaggtctgaccaccaggcgcccccttgacagggaggaagcagcagagaaa 454
Query: 359 ----------------------gagagggagagagagaaagctttgaccaccaatctgca 396
||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gagagagagagagagagagagagagagggagagagagaaagctttgaccaccaatctgca 394
Query: 397 tcctggtttcatcatgcctcattttcatggtgccctgacaagcacttcctgagtgttagt 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tcctggtttcatcatgcctcattttcatggtgccctgacaagcacttcctgagtgttagt 334
Query: 457 ttccctgtttgagcatcgagtgtagaactcctagtaacacatggtgtggtagagaaggta 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttccctgtttgagcatcgagtgtagaactcctagtaacacatggtgtggtagagaaggta 274
Query: 517 ggggaagacactctgcagacaatagccaggatgatcccctgccctctgggtcact 571
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ggggaagacactctgcagacaatagccaggatgatcccctgccctctgggtcact 219
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
