NACTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAACTTATCCGATAAGGCAAATGAGAAAAAATAGTATCTGTA
AGTGTCATAGAGATTCATACCATTAAAGAGAAACTACACACAGGGTAATG
AGATAATAGCATACTAGGGCAAGAATATACCCAAAGGGAGTTTTGGGGTA
TATATAAACCTGAAGAATTCTGGAAAGGCTACATTTGAAAAAGAGAGAAC
TTGAAGAAAGAGAGCCCACAGGCATTTCACTTCAGCAAAATTGATGGGGG
AAGTATTTTTGCAGCTCAGTTAAAAATACCCAGATGTAAATTAAGCACTC
CTTACATAGGAGATGTGGCATTCTACGTTGCAAACTAGCAAACATTTGCA
TTATACACATTGTTCTGGTTTCAAAGGCAAGAAAATGAAAGACTTTCCTG
GTCATGGAGACTTGCCAAGATGCCATAAGGCCAGACAGTATGTTGTATGA
CAAGATTCTTTTTCTGAGGCTCCTTGATAAACCAAGCCCAAAGCCAGGAA
GGTAAAGGCTAAATTACACTGAAATCCCCAGCATGTTGAGGTTCACAAAA
CATGGAAAATTACTGTAGGAAATTGCACAGCACTATGTGGGGCTCTTACA
AGGCAGAGGCTAAGTATATTATACTGAGGGGACAGAGCTACTCAAACATA
TTTCCACCCAAGTAATGCCAN

CTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGTTTTCAAGAATCTCATGAT
TTTTCTGGTTGTTGTAGTAGTTCATAAAAATGGCCTTTTCATTAAATTTT
CGTTTCTATGCCCACTCTGAGAGATCTGGGCAGTTTGAGAAGTACCAACT
CCCTCTTCTTGTTCTGAGCCAGGTTCCACCACTATAAGGAAATGCCTCCA
TAAATTCACTGGCTCAAAATAAAATAAAATAAAATAAAATAAAATAAAAT
AAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAAT
AAAATAAAAGATGGTGGCTAGACAATAGATAGATGGTGGATAAAAAGTCA
TCTATAAAAGATAGATAGATGATAGGTAGGTTGATAGATTGATGGAGAGA
TAACATATTAATGAGTGTCAGCAAATTGATGGGTGTGAAAATAGCACCTT
TCCTCTTGCTATTTCTTTATCACTTCAGCAAGACAGTGTTTATGGCAGAC
AGTGTTTTCCCTACTACCATTCACTACATTTCTCATACTTCGGTGCTCCA
CAGTTTGAGAAGCTGTATCTTCATCTCCATCCTGTCCATCAAGATGCTGT
TGTCCTTCTAGATTTACATGAGCCACATTGCATATCAAAATAAACAAGAG
TTATTCCTCTTCTTATAGAATTGTG

Query= MSMg01no455_a08.g1 MSMg01no455_a08.g1 CHROMAT_FILE:
MSMg01no455_a08.g1 PHD_FILE: MSMg01no455_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:24 2005
         (567 letters)



>mm_chr11_14534117_14535083
          Length = 967

 Score =  561 bits (290), Expect = e-164
 Identities = 379/448 (84%), Gaps = 62/448 (13%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgttttcaagaatctcatgatttttctggttgttgtagtagttcataaaaatggccttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 387 ctgttttcaagaatctcatgatttttctggttgttgtagtagttcatgaaaatggccttt 328

                                                                       
Query: 61  tcattaaattttcgtttctatgcccactctgagagatctgggcagtttgagaagtaccaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 327 tcattaaattttcgtttctatgcccactctgagagatctgggcagtttgagaagtagcaa 268

                                                                       
Query: 121 ctccctcttcttgttctgagccaggttccaccactataaggaaatgcctccataaattca 180
           ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 267 ctccctcttcttgttctgagccaggttccactactgtaaggaaatgcctccataaattca 208

                                                                       
Query: 181 ctggctcaaaataaaataaaataaaataaaataaaataaaataaaataaaataaaataaa 240
           |||||||                                                     
Sbjct: 207 ctggctc----------------------------------------------------- 201

                                                                       
Query: 241 ataaaataaaataaaataaaataaaataaaataaaataaaagatggtggctagacaatag 300
                  |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 200 -------aaaataaaataaaataaaataaaataaaataaaagatggtggctagacgatag 148

                                                                       
Query: 301 atagatggtggataaaaagtcatctataaaagatagatagatgataggtaggttgataga 360
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atagatggtgggtaaaaagtcatctataaaagatagatagatgataggtaggttgataga 88

                                                                       
Query: 361 ttgatggagagataacatattaatgagtgtcagcaaattgatgggtgtgaaaatagcacc 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87  ttgatggagagataatatattaatgagtgtcagcaaattgatgggtgtgaaaatagcacc 28

                                       
Query: 421 tttcctcttgctatttct-ttatcactt 447
           ||||||||||||||| || |||||||||
Sbjct: 27  tttcctcttgctatt-ctgttatcactt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)