NCCTCTATAATTTGCGGCGCTAAACGAGGCCAATCGGCAGCGGAGCCGNN
GGAATCCCATCACACCACACGCTCTTGACTCTAGCTGCATATGTATCAAA
AGATGGCCTAGTCTTTCATCACTGGAAAGAGAGGCCCATTGGACATGCAA
ACTTTATATGCCCCAGTACAGGGGAATGCCAGGGCCACAAAGTGGGAGTT
TGTTGGTAGGGGAGTAGGCGTTGACCCTTTTCCCTCTTCTTTTTTTTTCT
CACTTTTTTTTCCCTTTTGGTCCCTTGACATCACCTTACATCTCATACAC
CAATCCTATTTTTTTTTTACGCAGAATCCATTATTGTTATTCTTTTTCCT
TCTCTTTCTCTCTTGCTTGTCGCAGACTTACGCCATTTCTTCTCCTCTTC
CTCTTGACTTTTTTTCCCCCTTTTTTTATTTGTTCTTCTCTTTCCCCGCC
CTTTTTCTTCCCTTTTATCCTTCTCTTTTTTCCCCTTTTCACCTTCCTTA
TTTCCTAATACTTTTTCCACCTATACTCACCTCATCATGATGGCCGTATC
TTACTCATCACACCTTCTCTTCTTTATATTTCTTCCCTTCTCTCCCTATC
TTCCCCCCCTCTTATTCCCCCCCTCATTTTTTTTCCCTTCTTCTCCTTTT
TTCCTCTCTTTCTTCCTCCCTTCATTCTTCCCCCCCTCTCCACTCTCTCC
CTCCTTTCTTCATATATCACCCACTATATATAATTCCTTTTTCATTCTAC
CCCTATTCTCTTTN

NTTTCGATGCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTAATTGTTCCATTGTTGTTCTG
TTATCTTCTCCACAGTCTTGTTCTATTTTATAATTATAATTAAACATCAA
AAGCAGAACTGTCATGGTACATGAACTGTAAAAAACACTCAGAAGTTCAT
TTGTGTTAATTCCCCTTAAAACTTAAATTAATGAATGTGACATAAGTAAG
AAGGTAGCATTATAAGGATCTCATCTCCAGCTGAGGGCCATTTTTTATTA
TTGGCTTTTAGGGCCAGCTTTTTTCTGAAGTCAGTTGCTAATCGCTCTTC
CAAAGGAAGCTGACCTGAAATGGGCAAGCTTCTGATGAGGTTTAGAGAAA
GCCGATTAGGGTCCTACCTTCCTGGCTTGATTTCAGCTTCAATAAATTAA
TACAATTTAATCCACAATAACTTTTCCTTTCAGTTTCTAAGAGGACAGAT
AATTAGGGCTGGAACTTGCCCTGTCTGAACTGTGATATTGTTTAAAATAG
AATTATGTTTCTTCATGGACTTTTTTCCCTGCCCCCTCTGCTTCTATATT
CCTTTCAATTCTACCCATTCCCCCGGTCCCTTTTTTGGTACTTCTCTGAG
TTTTTCCTTATTTTCAATATCCTTGATTCTATCCTTTCCTCCCCCTTCTC
ATTTTTTTCCTTCTTTTTTATTTCCTCTCTCTCCTTTTTACTTCCCTCCC
TTCCTCCTTTTTCTTTCTCTTN

Query= MSMg01no456_p17.g1 MSMg01no456_p17.g1 CHROMAT_FILE:
MSMg01no456_p17.g1 PHD_FILE: MSMg01no456_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:00 2005
         (445 letters)



>mm_chr11_14009357_14010201
          Length = 845

 Score =  795 bits (411), Expect = 0.0
 Identities = 434/445 (97%), Gaps = 6/445 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttaattgttccattgttgttctgttatcttctccacagtcttgttctattttataattat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||      ||||
Sbjct: 706 ttaattgttccattgttgttctgttatcttctccacagtcttgttctatt------ttat 653

                                                                       
Query: 61  aattaaacatcaaaagcagaactgtcatggtacatgaactgtaaaaaacactcagaagtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aattaaacatcaaaagcagaactgtcatggtacatgaactgtaaaaaacactcagaagtt 593

                                                                       
Query: 121 catttgtgttaattccccttaaaacttaaattaatgaatgtgacataagtaagaaggtag 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 592 catttgtgttaattccccttaaaacttaaattaacgaatgtgacataagtaagaaggtag 533

                                                                       
Query: 181 cattataaggatctcatctccagctgagggccattttttattattggcttttagggccag 240
           ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 532 cattataaggatctcatctccagctgagggccactttttattattggcatttagggccag 473

                                                                       
Query: 241 cttttttctgaagtcagttgctaatcgctcttccaaaggaagctgacctgaaatgggcaa 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 ctttgttctgaagtcagttgctaatcgctcttccaaaggaagctgacctgaaatgggcaa 413

                                                                       
Query: 301 gcttctgatgaggtttagagaaagccgattagggtcctaccttcctggcttgatttcagc 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 412 gcttctgatgaggtttagagaaagccaattagggtcctaccttcctggcttgatttcagc 353

                                                                       
Query: 361 ttcaataaattaatacaatttaatccacaataacttttcctttcagtttctaagaggaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttcaataaattaatacaatttaatccacaataacttttcctttcagtttctaagaggaca 293

                                    
Query: 421 gataattagggctggaacttgccct 445
           |||||||||||||||||||||||||
Sbjct: 292 gataattagggctggaacttgccct 268


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space:   363225
Effective search space used:   363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)