Query= MSMg01no457_e02.b1 MSMg01no457_e02.b1 CHROMAT_FILE:
MSMg01no457_e02.b1 PHD_FILE: MSMg01no457_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:24 2005
(473 letters)
>mm_chr11_54243233_54244105
Length = 873
Score = 704 bits (364), Expect = 0.0
Identities = 397/408 (97%), Gaps = 2/408 (0%)
Strand = Plus / Minus
Query: 64 tacattggtgttctgcctctctgtatgtctgagtgaggatgtcagggtccctggaactgg 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 873 tacattggtgttctgcctctctgtacgtctgagtgaggatgtcagggtccctggaactgg 814
Query: 124 aattacaaacagttgtgaactgccatgtgagtgctgggaattgaactcgggtccttcgga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 813 aattacaaacagttgtgaactgccatgtgagtgctgggaattgaactcgggtccttcaga 754
Query: 184 agagcaaccaatgctcctaaccactgagccagctctccagccccatcaacaaatattttt 243
||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 753 agagcaaccaatgttcctaaccactgagccatctctccagccccatcaacaaatattttt 694
Query: 244 taaacatttataattattattatgtgcctatcagctttactaaaagatggaaacacagca 303
||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 693 taaacgtttaaaattattattatgtgcctatcagctttattaaaagatggaaacacagca 634
Query: 304 gataataatatatgatttctatattggtggagcttagagtatttggaaaacgtagacctg 363
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 633 gataataatatatgatttctatattggtggagcttagagtatttgg-aaacatagacctg 575
Query: 364 ataggtgactgtatgctctcacttatattaatcctatgatgttgacatctatagaaaagc 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 574 ataggtgactgtatgctctcacttagattaatcctatgatgttgacatctatagaaaagc 515
Query: 424 taattgaattaactc-tatcacctagatagtctatattgatcataaac 470
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 514 taattgaattaactcttatcacctagatagtctatattgatcataaac 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_e02.g1 MSMg01no457_e02.g1 CHROMAT_FILE:
MSMg01no457_e02.g1 PHD_FILE: MSMg01no457_e02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:24 2005
(303 letters)
>mm_chr11_54066742_54067444
Length = 703
Score = 540 bits (279), Expect = e-158
Identities = 297/303 (98%)
Strand = Plus / Plus
Query: 1 tgccccaagccttatctccaactgagaggtcatcaggcacccagaggggacactgtcttt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 tgccccaagccttatctccaactgagaggtcagcaggcacccagaggggacactgtcttt 260
Query: 61 atctgtgccccttgaaagaatctctgggagtgcatggggaaaagatcaaaggagaaatga 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 atctgtgccccttgaaagaatctctgggagtgcatggggaaaagaccaaaggagaaatga 320
Query: 121 ggggagaagccatcctaacctcctggagtgctaagggcccttcttcctaccctaggtgta 180
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 321 ggggagaagccatcctaacctcctgaagtgctaagggcccttcttccaaccctaggtgta 380
Query: 181 gcgggaattgcagacccttggttggctctgacacctgccagcttcaggagctgaggggcc 240
| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgggagttgcagacccttggttggctctgacacctgccagcttcaggagctgaggggcc 440
Query: 241 ataatcaaagcggtggttgctgctttatattttcatcaggacagggtcctagaaggagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataatcaaagcggtggttgctgctttatattttcatcaggacagggtcctagaaggagcc 500
Query: 301 att 303
|||
Sbjct: 501 att 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 703
Length adjustment: 9
Effective length of query: 294
Effective length of database: 694
Effective search space: 204036
Effective search space used: 204036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
