Query= MSMg01no457_l09.b1 MSMg01no457_l09.b1 CHROMAT_FILE:
MSMg01no457_l09.b1 PHD_FILE: MSMg01no457_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:02 2005
(347 letters)
>mm_chr11_64967314_64968059
Length = 746
Score = 630 bits (326), Expect = 0.0
Identities = 341/346 (98%), Gaps = 1/346 (0%)
Strand = Plus / Minus
Query: 1 cattttgtcctgctctgagtgttcaagcttgcatgttgtatgtgaggataggccagactg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 545 cattttgtcctgctctgagtgttcaagcttgcatgttgtatgtgaggataggtcagactg 486
Query: 61 ctatgggaactctctagtgacatactgtcacggtccttcattttgggctcattactaatg 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 485 ctatgggaactctctagtgacatactgtcacagtccttcattttgggctcattactaatg 426
Query: 121 agttgatgtggagagtcgtgtcatcaaggtccttgctcctctttgaagggtctggaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agttgatgtggagagtcgtgtcatcaaggtccttgctcctctttgaagggtctggaatct 366
Query: 181 catgtgaccccctctactctttctccagtactgctgaaggtgaagagagaatagcaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 catgtgaccccctctactctttctccagtactgctgaaggtgaagagagaatagcaaaat 306
Query: 241 ggcatttattgtttgttattcaggctctttgatctttcactttagaatccagaaaggttg 300
||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 ggcatttattggttggtattcaggctctttgatctttcactt-agaatccagaaaggttg 247
Query: 301 ctatgctaacatgtcactggctggaactcgtcacagagttcccctg 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctatgctaacatgtcactggctggaactcgtcacagagttcccctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 746
Length adjustment: 9
Effective length of query: 338
Effective length of database: 737
Effective search space: 249106
Effective search space used: 249106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_l09.g1 MSMg01no457_l09.g1 CHROMAT_FILE:
MSMg01no457_l09.g1 PHD_FILE: MSMg01no457_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:02 2005
(245 letters)
>mm_chr11_64826924_64827574
Length = 651
Score = 373 bits (193), Expect = e-108
Identities = 233/249 (93%), Gaps = 6/249 (2%)
Strand = Plus / Plus
Query: 1 ctcagatcccctgtggcttcaaggaggctcttgaaatggaggaggagtggctcttccgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagatcccctgtggcttcaaggaggctcttgaaatggaggaggagtggctcttccgag 260
Query: 61 gatttactggctttcaagtcatctgggacagacgccgtcactggacagacaagctcagga 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 gatttactggctttcaagtcatctgggacagacgccgtcacgggacagacaagctcagga 320
Query: 121 aggttatagaccctagggtgggtgtcaatgtgtttcccctggtagtcaaagcaggccttt 180
| ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 321 aagttatagactctagggtgggtgtcaatgtgtttcctctggtagtcagagcaggccaag 380
Query: 181 gaagattagcaagct-----gcttcctgggtttgggg-ttttaacaggagaaaggagaaa 234
||||||||||||||| |||| |||||||||||| ||||||||||| ||||||||||
Sbjct: 381 gaagattagcaagctttaatgctttctgggtttggggattttaacaggaaaaaggagaaa 440
Query: 235 gcttattcc 243
|||||||||
Sbjct: 441 gcttattcc 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 651
Length adjustment: 9
Effective length of query: 236
Effective length of database: 642
Effective search space: 151512
Effective search space used: 151512
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
