Query= MSMg01no458_d12.b1 MSMg01no458_d12.b1 CHROMAT_FILE:
MSMg01no458_d12.b1 PHD_FILE: MSMg01no458_d12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:44 2005
(577 letters)
>mm_chr11_66400956_66401932
Length = 977
Score = 737 bits (381), Expect = 0.0
Identities = 420/433 (96%)
Strand = Plus / Minus
Query: 1 atggtgcaatcttctctcagctcattgcaccctctagttttctagcctctgagaggaatc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 433 atggtgcaatcttctctcagctcattgtaccctctagttttctagcctctgagaggaatc 374
Query: 61 cctgtactataagaattgaacactgtagttttctatccaaacagaccctcagaactttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cctgtactataagaattgaacactgtagttttctatccaaacagaccctcagaactttga 314
Query: 121 ttgaatcagtgatgataattcatatgtagaaagttataatgtgacttaactcccccaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgaatcagtgatgataattcatatgtagaaagttataatgtgacttaactcccccaaat 254
Query: 181 ggtgagtaaatttattaactactttctctgtgctagagacctttctaaggttttgttttt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 253 ggtgagtaaatttattaactactttctctgtgctagaggcctttctaaggttttgttatt 194
Query: 241 gttcttttttgcttgctattgttttgataaagacaccataaccaaaagccttttgagaaa 300
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 193 gttctaatttgcttgctattgttttgataaagacaccataaccaaaagcctcttgagaaa 134
Query: 301 ggaagggtttatttagcttacatcctgaccacagtctaccattttgggacaccaacgcag 360
|||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 133 ggaaaggtttattcagcttacatcctgatcacagtctaccattttgggacaccaaggcag 74
Query: 361 gaactcaaacagggaagaaacctggaggcaggaactgaggctatggaggaaaactgttca 420
|||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 73 gaactcaaacaggggagaaacctggaagcaggaactgaggctgtggaggaaaactgttca 14
Query: 421 gctggcttacttc 433
|||||||||||||
Sbjct: 13 gctggcttacttc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_d12.g1 MSMg01no458_d12.g1 CHROMAT_FILE:
MSMg01no458_d12.g1 PHD_FILE: MSMg01no458_d12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:44 2005
(332 letters)
>mm_chr11_66255587_66256317
Length = 731
Score = 580 bits (300), Expect = e-170
Identities = 324/332 (97%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1 gtaggtataaaaattcattttaaaaacatttaaaagataatttttagtaacccgcaataa 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |
Sbjct: 201 gtaggtataaaaattcattttaaaaatatttaaaagataatttttagtaacctgcaat-a 259
Query: 61 aaatctcataaaatcccacctttggataactcgaaattgttatcttactgatgaagtcga 120
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||
Sbjct: 260 aaatctcataaaatcccacctttggttaactcgaaattgttatcttactgatgaagccga 319
Query: 121 aaagatatttctataagtacctgttaccaagcattttcttatggagctcacaataaatat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 aaagatatttctataagtacctgttaccaggcattttcttatggagctcacaataaatat 379
Query: 181 attgagttttttaaaagcaagattaagcaatattgaaatagataacataaatctgtcatt 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 attgagatttttaaaagcaagattaagcaatattgaaatagataacataaatctgtcatt 439
Query: 241 attgtagatgataggacagttataaaattcatggatgtcaatatgattaaaactctgagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 attgtagatgataggacagttataaaattcatggatgtcaatatgattaaaactctgagt 499
Query: 301 aaaattctataaagagagcagatataagtaaa 332
||||||| ||||||||||||||||||||||||
Sbjct: 500 aaaattcaataaagagagcagatataagtaaa 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
