Query= MSMg01no458_h09.b1 MSMg01no458_h09.b1 CHROMAT_FILE:
MSMg01no458_h09.b1 PHD_FILE: MSMg01no458_h09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:04 2005
(556 letters)
>mm_chr11_94609768_94610723
Length = 956
Score = 1006 bits (520), Expect = 0.0
Identities = 546/556 (98%), Gaps = 5/556 (0%)
Strand = Plus / Plus
Query: 1 gagaaaccctgtcttgaaaaaccaaagaaaagaaaagaaaagaaaagaaaagaagagaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 206 gagaaaccctgtcttgaaaaaccaaagaaaagaaaagaaaagaaaagaaaagaa---aag 262
Query: 61 agaagagaagagaagagaagagaagagaagagaaaagaaatagtaattgttacaatggta 120
| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 a-aa-agaaaagaagagaagagaagagaagagaaaagaaatagtaattgttacaatggta 320
Query: 121 acaaagcatttcgtaaaactattaatatttaaagtcactatagttataggaagtcacaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaagcatttcgtaaaactattaatatttaaagtcactatagttataggaagtcacaag 380
Query: 181 acagaataacaaaccagcaggtgacaggacacacccttcacattcctgtaattctactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagaataacaaaccagcaggtgacaggacacacccttcacattcctgtaattctactat 440
Query: 241 tcagtctgatttggcaagatagagaattcaaattaagcacctggaccttgagtaatcagg 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtctgatagggcaagatagagaattcaaattaagcacctggaccttgagtaatcagg 500
Query: 301 gcctggcagagatcgattaggggacagtgcttcccacacaactgtggggactgagttggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctggcagagatcgattaggggacagtgcttcccacacaactgtggggactgagttggg 560
Query: 361 attcccagaacccatgtaccaagctgattgtggtcacataaatttcttattaagcaagtg 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 attcccagaacccatgtaccaagctgatcgtggtcacataaatttcttattaagcaagtg 620
Query: 421 tgagtggatggatcccagagactccctgtccaaccagcttatccgaaatggtgaactctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagtggatggatcccagagactccctgtccaaccagcttatccgaaatggtgaactctg 680
Query: 481 ggctcaataagatgcccagtttaaaaaaaaagtaagtaaacaaataaatgtaggtagata 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 ggctcaataagatgcccagtttaaaaaataagtaagtaaacaaataaatgtaggtagata 740
Query: 541 gaagatactagggcat 556
||||||||||||||||
Sbjct: 741 gaagatactagggcat 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_h09.g1 MSMg01no458_h09.g1 CHROMAT_FILE:
MSMg01no458_h09.g1 PHD_FILE: MSMg01no458_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:04 2005
(194 letters)
>mm_chr11_94831272_94831865
Length = 594
Score = 215 bits (111), Expect = 2e-60
Identities = 138/147 (93%)
Strand = Plus / Minus
Query: 1 gccaccgaacaagccgttagaagctcactgtggctcttggtgaggtttcaagggacccta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gccaccgaacaagcctttagaagctcactgtggctcttggtgaggtttcaagggacccta 288
Query: 61 gagatttctaagtctaggctggaaactgctggtatgccctgctcctgggaaccagcaaag 120
|||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 287 gagatttctaagtccaggctgggaactgctagtatgccctgctcctgggaaccagcaaag 228
Query: 121 ggattctttttcagggacaaccttcta 147
||| || |||||||||||||||||
Sbjct: 227 ggaaactccatcagggacaaccttcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
