Query= MSMg01no459_f01.b1 MSMg01no459_f01.b1 CHROMAT_FILE:
MSMg01no459_f01.b1 PHD_FILE: MSMg01no459_f01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:12 2005
(384 letters)
>mm_chr11_55496807_55497590
Length = 784
Score = 526 bits (272), Expect = e-154
Identities = 334/374 (89%), Gaps = 33/374 (8%)
Strand = Plus / Minus
Query: 1 acccatctaataaagccaggtgcagtagaatgcacttgtaaatgtcagtgccaagagatg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 347 acccatctaataaagccaggtgcagtagaatgcacttgtaaatgccagtgccaagagatg 288
Query: 61 gagatagaaatggaaagatggctggagcttactggacagataccctatcagtattgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gagatagaaatggaaagatggctggagcttactggacagataccctatcagtattgggaa 228
Query: 121 ggcgcaggccaatgaaaaaccttgttccaaaacaaaacaaa---aaaaaccaaaaaagca 177
| |||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||
Sbjct: 227 gtcgcaggccaatgaaaaaccttgttccaaaaaaaaaaaaacaaaaaaacaaaaaaagca 168
Query: 178 aaaaaacaaaaaaataggtaggtatgggatggcagccaagttgtcctctggtttctctct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aaaaaacaaaaaaataggtaggtatgggatggcagccaagttgtcctctggtttctctct 108
Query: 238 ctttctctctctctctctctctctctctctctctctctctctctctctctctctctctct 297
|| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 ct------------------ctctctctctctctctctctctctctctctctctctctct 66
Query: 298 ctctctctccctccctccctccctccctccctccctctcttcccccccaaccccatccca 357
||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct: 65 ctctctctccctccctccctctctc--tcc----------tcccccccaaccccatccca 18
Query: 358 tttggtgtcttgct 371
|||| |||||||||
Sbjct: 17 tttgttgtcttgct 4
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 104
Number of extensions: 36
Number of successful extensions: 36
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_f01.g1 MSMg01no459_f01.g1 CHROMAT_FILE:
MSMg01no459_f01.g1 PHD_FILE: MSMg01no459_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:12 2005
(393 letters)
>mm_chr11_55384665_55385457
Length = 793
Score = 530 bits (274), Expect = e-155
Identities = 316/330 (95%)
Strand = Plus / Plus
Query: 1 ctaaaagattccagctgagggcaattagtgcagcctatgggtaaagtccaaaacctccta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaaagattccagctgagggcaattggtgcagcctatgggtaaagtccaaaacctccta 260
Query: 61 tgccagaatggatttggcttagctagtggtggtcataagtggcattatttagtgtctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccagaatggatttggcttagctagtggtggtcataagtggcattatttagtgtctgtt 320
Query: 121 tcagagatttcacataaaacctcagacttaagtcctgtcttggaggacctgactaaccac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagagatttcacataaaacctcagacttaagtcctgtcttggaggacctgactaaccac 380
Query: 181 agagttttttcactccttcttggcagccgtggccaggtacaaaggaggagtggaccttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagttttttcactccttcttggcagccgtggccaggtacaaaggaggagtggaccttgc 440
Query: 241 aaggttgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgt 300
|||||||||||||| ||| ||| ||| ||| ||| ||| ||| || ||| ||| ||| |
Sbjct: 441 aaggttgtctgtctatctatctatctatctatctatctatctatccatctatctatctat 500
Query: 301 ctatctatctatctatctatctatctatct 330
||||||||||||||||||||||||||||||
Sbjct: 501 ctatctatctatctatctatctatctatct 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
