Query= MSMg01no459_l04.b1 MSMg01no459_l04.b1 CHROMAT_FILE:
MSMg01no459_l04.b1 PHD_FILE: MSMg01no459_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(244 letters)
>mm_chr11_25286759_25287402
Length = 644
Score = 433 bits (224), Expect = e-126
Identities = 239/244 (97%)
Strand = Plus / Minus
Query: 1 tcatgatttctgttctatctccctcccgccccccagcatgtgaatgatgactaagatcct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 444 tcatgatttctgttctatctccctcccgccctccagcatgtgaatgatgactaagatcct 385
Query: 61 tgctagttttcctaacaagcgctttcaccaagacaaacattagctcttcagatagtcaaa 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgctagttttcctaacaagttctttcaccaagacaaacattagctcttcagatagtcaaa 325
Query: 121 tgaaagctttggtgtgctttttattttacccagttggaaacaatatttgacacatatttt 180
|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 324 tgaaagctttggtgtgctttttattttacccagttgaaaacaatatttgacatatatttt 265
Query: 181 ttaaaaactatttgggtctatttgaagtccagactacatttcaagaactatagtccactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttaaaaactatttgggtctatttgaagtccagactacatttcaagaactatagtccactc 205
Query: 241 taga 244
||||
Sbjct: 204 taga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no459_l04.g1 MSMg01no459_l04.g1 CHROMAT_FILE:
MSMg01no459_l04.g1 PHD_FILE: MSMg01no459_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:43 2005
(318 letters)
>mm_chr11_25162923_25163639
Length = 717
Score = 584 bits (302), Expect = e-171
Identities = 311/314 (99%), Gaps = 1/314 (0%)
Strand = Plus / Plus
Query: 1 tctgttatttgcatattaatagcacctgctgaaacactttgggatttactgccactgcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgttatttgcatattaatagcacctgctgaaacactttgggatttactgccactgcca 260
Query: 61 gcagagggacagaaggaaaatatataaaaattcctttatttcactgtgttaggcataaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagagggacagaaggaaaatatataaaaattcctttatttcactgtgttaggcataaaa 320
Query: 121 cactcaggatggactaagattataaattaacagcaggagtggatgcgttcatgctgcaca 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgctcaggatggactaagattataaattaacagcaggagtggatgcgttcatgctgcaca 380
Query: 181 tggaggctgaatgtattgcacacatttaagccaatacagacaaggtcactgggagtctgc 240
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 381 tggaggctgaatgtattgcacacgtt-aagccaatacagacaaggtcactgggagtctgc 439
Query: 241 tgggaaagtatatcctctaaacacagagccaggagatgtgagtgcctgtctctgtgctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgggaaagtatatcctctaaacacagagccaggagatgtgagtgcctgtctctgtgctcc 499
Query: 301 tctctcagcaactg 314
||||||||||||||
Sbjct: 500 tctctcagcaactg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
