Query= MSMg01no459_l15.b1 MSMg01no459_l15.b1 CHROMAT_FILE:
MSMg01no459_l15.b1 PHD_FILE: MSMg01no459_l15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:45 2005
(409 letters)
>mm_chr11_3863645_3864453
Length = 809
Score = 754 bits (390), Expect = 0.0
Identities = 404/414 (97%), Gaps = 10/414 (2%)
Strand = Plus / Minus
Query: 1 tgatcactcttttggcggctccgcctgtctccacaactccttccacagaaagcccgtcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgatcactcttttggcggctccgcctgtctccacaactccttccacagaaagcccgtcac 550
Query: 61 agttcttcccggcttccaggggcctacgtgcagaaggttcgctccggcggccgtctcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agttcttcccggcttccaggggcctacgtgcagaaggttcgctccggcggccgtctcaag 490
Query: 121 acttctcggtccccagaggccagggaaagtgataaagccggagctccgacctccgctgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acttctcggtccccagaggccagggaaagtgataaagccggagctccgacctccgctgga 430
Query: 181 actcactcaccttcttcttctccagacctcccatagctccacgttgagaaattcaaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actcactcaccttcttcttctccagacctcccatagctccacgttgagaaattcaaggca 370
Query: 241 gccaga-----tttttagagctacttcctcccgcacgtgccctgcctagggccctgaagg 295
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gccagaacacc-----agagctacttcctcccgcacgtgccctgcctagggccctgaagg 315
Query: 296 accccacgccgccagctgagggctgtctgaaaatatgcctgtacaaatccagagaaagtt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 accccacgccgccagctgagggctgtctgaaaatatgcctgtacaaatccagagaaagtt 255
Query: 356 gtgcttttggcgacctcgttatttacaaccaaattctctaaagctcaacaattg 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtgcttttggcgacctcgttatttacaaccaaattctctaaagctcaacaattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no459_l15.g1 MSMg01no459_l15.g1 CHROMAT_FILE:
MSMg01no459_l15.g1 PHD_FILE: MSMg01no459_l15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:32:45 2005
(386 letters)
>mm_chr11_3729229_3730014
Length = 786
Score = 677 bits (350), Expect = 0.0
Identities = 377/386 (97%)
Strand = Plus / Plus
Query: 1 tccacggcagctcagacttcatgctcacagctttgtgaggtgccatggtgccgtcttggg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccacggcagctcaggcttcatgctcacagctttgtgaggtgccatggtgccgtcttggg 260
Query: 61 gatgcttacggggaacatgatcctgctatgttctgactagcctcccatgccttcctttga 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgcttacagggaacatgatcctgctatgttctgactagcctcccatgccttcctttga 320
Query: 121 gatctggtgggatccaggaccctgtaaatcttgcgttctacatgcctacataaccaggat 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatctggtgggatccaggaccctataaatcttgcgttctacatgcctacataaccaggat 380
Query: 181 ggatgacacagactcaagcagatccctgtggactacagcatcacctgagtgcctgggttt 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ggatgacacagactcaagcagatctctgtggactacagcatcacctgagtgcctgggttt 440
Query: 241 gattaatgtaggaaaatacctatgtgactctatgcagtatgttctgaatctctcgaagta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 441 gattaatgtaggaaaatacctatgtgactctatgcagtatgttctgaatctctcaaagca 500
Query: 301 agtgaatcttgattctcttgatcttgccataggttgcccctggccaactgttgggactct 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 501 agtgaatcttgattctcttgatcttgccataggttgggtctggccaactgttgggactct 560
Query: 361 ctgaaggcatctttctgattgttctg 386
||||||||||||||||||||||||||
Sbjct: 561 ctgaaggcatctttctgattgttctg 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 786
Length adjustment: 9
Effective length of query: 377
Effective length of database: 777
Effective search space: 292929
Effective search space used: 292929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
