Query= MSMg01no461_c04.b1 MSMg01no461_c04.b1 CHROMAT_FILE:
MSMg01no461_c04.b1 PHD_FILE: MSMg01no461_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:37 2005
(243 letters)
>mm_chr11_3538728_3539370
Length = 643
Score = 439 bits (227), Expect = e-128
Identities = 239/243 (98%)
Strand = Plus / Plus
Query: 1 cccatactatagtcccttgatagattcagcctagtggcaccaggtgtttgcgttgtctac 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cccatactatagtcccttgatagattcagcctagtggcaccaggtgtttgtgttgtctac 260
Query: 61 tcttgtgttcacataacaaaagtgtctaacaaagcatttctcaagatatgtgcctgttgt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tcttgtgttcacataacaaaagtgtctaacaaagcatttctcaagatatatgcctgttgt 320
Query: 121 tacaagacacacaactgttagtatagttaacctataggaatcttgtgtatgggcgtatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 tacaagacacacaactgttagtatagttaacctataggaatcttgtgtatgggcgtagta 380
Query: 181 attgggagtctttcttttacttatgttggagatgtgtcttagtctaacaaatcctgtata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 attgggagtctttcttttacttatgttggagatgtgtcttagtctaacaaatcctgtaga 440
Query: 241 gat 243
|||
Sbjct: 441 gat 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_c04.g1 MSMg01no461_c04.g1 CHROMAT_FILE:
MSMg01no461_c04.g1 PHD_FILE: MSMg01no461_c04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:37 2005
(153 letters)
>mm_chr11_3708437_3708989
Length = 553
Score = 284 bits (147), Expect = 1e-81
Identities = 150/151 (99%)
Strand = Plus / Minus
Query: 1 atagctgttatgagatgtgtgtgttccacgggccacaggttgcacctgcctgggcctaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atagctgttatgagatgtgtgtgttccacgggccacaggttgcacctgcctgggcctaaa 292
Query: 61 tattcccattcccaccccacttggcaatggcaggcccacggggtcagggagcagagagaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 291 tattcccattcccaccccacttggcaatgccaggcccacggggtcagggagcagagagaa 232
Query: 121 tgtaggactatgggcagctagcggatggtga 151
|||||||||||||||||||||||||||||||
Sbjct: 231 tgtaggactatgggcagctagcggatggtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
