Query= MSMg01no463_l22.b1 MSMg01no463_l22.b1 CHROMAT_FILE:
MSMg01no463_l22.b1 PHD_FILE: MSMg01no463_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:17 2005
(474 letters)
>mm_chr11_56964380_56965253
Length = 874
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Plus
Query: 1 gaccctccagttaggattgctaaggttgatgaaaacagagcctgctctgtctccaacaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaccctccagttaggattgctaaggttgatgaaaacagagcctgctctgtctccaacaat 260
Query: 61 gcagccgtctcaaaaacttatagataatcagcatcaccctcagctgctagagagtgctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagccgtctcaaaaacttatagataatcagcatcaccctcagctgctagagagtgctaa 320
Query: 121 cagggccaggtttagtcacacatgcttgcaagctaaccacatagcaagttcttgcctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagggccaggtttagtcacacatgcttgcaagctaaccacatagcaagttcttgcctgag 380
Query: 181 ctctgaaattaaggacctcaatgatgaaaatgaaataaaaatagtgtttactgagcactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgaaattaaggacctcaatgatgaaaatgaaataaaaatagtgtttactgagcactt 440
Query: 241 aaacactgctttttagtgattctcccatgctaatattaccagtttcctcctccttcttta 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacactgctttaaagtgattctcccatgctaatattaccagtttcctcctccttcttta 500
Query: 301 caatttaacttatttactatactgtgcctttgcaaggctcgggtaatacaattgtggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatttaacttatttactatactgtgcctttgcaaggctcgggtaatacaattgtggata 560
Query: 361 caattgcatctctttcctcacagagctcatgctcagaacagagggggaaaagcctcctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caattgcatctctttcctcacagagctcatgctcagaacagagggggaaaagcctcctcc 620
Query: 421 tgcttgagactgtattgctttcagaggatgaaatacctcaaatgttctttctgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcttgagactgtattgctttcagaggatgaaatacctcaaatgttctttctgt 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no463_l22.g1 MSMg01no463_l22.g1 CHROMAT_FILE:
MSMg01no463_l22.g1 PHD_FILE: MSMg01no463_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:38:17 2005
(511 letters)
>mm_chr11_57182989_57183899
Length = 911
Score = 745 bits (385), Expect = 0.0
Identities = 426/457 (93%), Gaps = 28/457 (6%)
Strand = Plus / Minus
Query: 55 gctgacatcattgtccttgggcttccacatgtctacacatacacacacacacacacacac 114
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 911 gctgacatcattgtcctttggcttccacatgtc------tacacacacacacacacacac 858
Query: 115 acacacacacacacacacacacacacacacacacatacacacacacaccatggaaagggc 174
|||||||||||||| ||||||||||||||||||||||||
Sbjct: 857 acacacacacacac----------------------acacacacacaccatggaaagggc 820
Query: 175 attctagaaggaggaccatgtgtgcaaaggcctggaggtaggaaaggctttgttggagga 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 attctagaaggaggaccatgtgtgcaaaggcctggaggtaggaaaggctttgttggagga 760
Query: 235 aggaaaatgagactagcgagtctggaaggattggtgaggagagatcaagatgaaccaatt 294
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 759 aggaaaatgagactagcgaggctggaaggattggtgaggagagatcaggatgaaccaatt 700
Query: 295 tgacagcagacaggaccaggtaccatctaccatactacctggggtcccaagcctacattc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgacagcagacaggaccaggtaccatctaccatactacctggggtcccaagcctacattc 640
Query: 355 tgtaagtgcagcagacaccagggtgaggtaactctagaagatcctgatgctctgatgggg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tgtaagtgcagcagacaccagggtgaggtaactctagaagatcctgatgctctgatgggg 580
Query: 415 ctgtcattaccaaagataaatggacccagatagatcactgatggtgatcctggtagcagt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ctgtcattaccaaagataaatggacccagatagatcactgatggtgatcctggtagcagt 520
Query: 475 gagctaggtaaggagactgagcaaagagtgaggtgac 511
|||||||||||||||||||||||||||||||||||||
Sbjct: 519 gagctaggtaaggagactgagcaaagagtgaggtgac 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 71
Number of extensions: 23
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
