Query= MSMg01no470_o23.b1 MSMg01no470_o23.b1 CHROMAT_FILE:
MSMg01no470_o23.b1 PHD_FILE: MSMg01no470_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:00 2005
(335 letters)
>mm_chr11_119324965_119325699
Length = 735
Score = 601 bits (311), Expect = e-176
Identities = 328/335 (97%), Gaps = 4/335 (1%)
Strand = Plus / Plus
Query: 3 ggaattctgggggcttcctcc--gggtatttaaatgcaccgccatgaaaggtgggctgtg 60
|||||||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattctgggggctt--ttcaggggtatttaaatgcaccgccatgaaaggtgggctgtg 260
Query: 61 ggttgtttgtttgtttgttatatagtcttgctcaaagaaacaacaagaagaaattagata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttgtttgtttgtttgttatatagtcttgctcaaagaaacaacaagaagaaattagata 320
Query: 121 tcctgacaggaaagatcaaatttgtcccaagaaactcaatgctcctaattaccacttaat 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgacagtaaagatcaaatttgtcccaagaaactcaatgctcctaattaccacttaat 380
Query: 181 gatgatgcccctccccccatgagctgggagctcatctatggtctggagaagctttctatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgatgcccctccccccatgagctgggagctcatctatggtctggagaagctttctatg 440
Query: 241 taagcaaacccagtttacgtcaggcttgtgtgcttatattttccaccatgggcctgtgag 300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 taagcaaacccagtttacgtcaggcttgtgtgcttatagtttccaccatgggcctgtgag 500
Query: 301 tgtggcccagtagcaactgatagttaacaagaaac 335
|||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtggcccagtagcaactgatagttaacaagaaac 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no470_o23.g1 MSMg01no470_o23.g1 CHROMAT_FILE:
MSMg01no470_o23.g1 PHD_FILE: MSMg01no470_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:00 2005
(383 letters)
>mm_chr11_119498763_119499545
Length = 783
Score = 710 bits (367), Expect = 0.0
Identities = 379/383 (98%)
Strand = Plus / Minus
Query: 1 aaacccatcctcggctacataacaagttcagatgctataaaataaagcaagtgtgatgag 60
|||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 583 aaacccatcctcagctacataacaagctcagatactataaaataaagcaagtgtgatgag 524
Query: 61 ggaaggagcagccagcctccactgtgggggccgcactcaccacacagcattgaaacccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ggaaggagcagccagcctccactgtgggggccgcactcaccacacagcattgaaacccaa 464
Query: 121 gcacccaagtgtgggaaggagcaggcaaatgcccctcaggacagaacccgagacttcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gcacccaagtgtgggaaggagcaggcaaatgcccctcaggacagaacccgagacttcagc 404
Query: 181 catttccacaaaagcagtatgagctgccagggacagcaaaggagaccaagcacatagatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 catttccacaaaagcagtatgagctgccagggacagcaaaggagaccaagcacatagatg 344
Query: 241 cagcagaccagcatcatggccactagaggagccagtgccactgcagcgagatgagcaggc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagcagaccagcagcatggccactagaggagccagtgccactgcagcgagatgagcaggc 284
Query: 301 ttgtatgcagtgcatacagcaagccatcccactcagtggtatgcagctaccatcctgcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttgtatgcagtgcatacagcaagccatcccactcagtggtatgcagctaccatcctgcta 224
Query: 361 ctgagctgctgcccagtgtggac 383
|||||||||||||||||||||||
Sbjct: 223 ctgagctgctgcccagtgtggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 783
Length adjustment: 9
Effective length of query: 374
Effective length of database: 774
Effective search space: 289476
Effective search space used: 289476
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
