Query= MSMg01no474_j15.b1 MSMg01no474_j15.b1 CHROMAT_FILE:
MSMg01no474_j15.b1 PHD_FILE: MSMg01no474_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:07 2005
(444 letters)
>mm_chr11_15138586_15139429
Length = 844
Score = 737 bits (381), Expect = 0.0
Identities = 411/425 (96%), Gaps = 9/425 (2%)
Strand = Plus / Minus
Query: 6 gaattcaaattcttcc-gcctcccaggttattttgtctgatgtacatttttctcccaaat 64
|||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 424 gaattcaaattc-tccagcctcccaggttattttgtctgatgtacatttttcccccaaat 366
Query: 65 tgggccttagccaattactctaatggtaatatcctgagaatttagcattaaatattaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tgggccttagccaattactctaatggtaatatcctgagaatttagcattaaatattaaag 306
Query: 125 tcatccagaatattatttttaaccaaattttaaatgtattcttaaaagtgtacaggcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tcatccagaatattatttttaaccaaattttaaatgtattcttaaaagtgtacaggcttg 246
Query: 185 tctatatttatttttggaattttattaagtaaagttatga-------tttttttttttga 237
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 245 tctatatttatttttggaattttattaagtaaagttatgattttttttttttttttttga 186
Query: 238 gacagggtttctctgtatggccctggctgtcttgtatctcactttgtagaccaggctggc 297
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 185 gacagggtttctctgtatggccctggctgtcttggaactcactttgtagaccaggctggc 126
Query: 298 ctcgaactcagaaatccacctgcctctgcctcctgaatgctgggattaaaggagtgtacc 357
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctcgaactcagaaatccacccgcctctgcctcctgaatgctgggattaaaggagtgtacc 66
Query: 358 accatgcccggcaagttatggttctttatatgtatatatattcttgtgtgtgtgtatgtg 417
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 accatgcctggcaagttatggttctttatatgtatatatattcttgtgtgtgtgtatgtg 6
Query: 418 tgtgt 422
|||||
Sbjct: 5 tgtgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no474_j15.g1 MSMg01no474_j15.g1 CHROMAT_FILE:
MSMg01no474_j15.g1 PHD_FILE: MSMg01no474_j15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:07 2005
(642 letters)
>mm_chr11_14995880_14996921
Length = 1042
Score = 1151 bits (595), Expect = 0.0
Identities = 630/642 (98%), Gaps = 2/642 (0%)
Strand = Plus / Plus
Query: 1 aatatctgctctctctaataaaaataaattcttcctctgtgatttaccaaaataaccaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatctgctctctctaataaaaataaattcttcctctgtgatttaccaaaataaccaat 260
Query: 61 atttcccccaaatagttcttcttttgctttgttaccattgaatttacagtgggtttacta 120
|||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attt-ccccaaatatttcttcttttgctttgttaccattgaatttacagtgggtttacta 319
Query: 121 ttccattccttttgaagaactactatatgacagttattttaatgtctctatctctaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccattccttttgaagaactactatatgacagttattttaatgtctctatctctaaaag 379
Query: 181 aagattaacaagatttcaaagaaacaaggagatatgagcaaagaccactagtttacacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagattaacaagatttcaaagaaacaaggagatatgagcaaagaccactagtttacacct 439
Query: 241 atttatgtatggctgaacatagatatcctgaaagaccaagcaagagcacacaaagacact 300
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaaatgtatgcctgaacatagatatcctgaaagaccaagcaagagcacacaaagacact 499
Query: 301 tttctcaaggaaaagaattggttaatgaggaaagactaacagaataacgaaaacaaataa 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 tttctcaaggaaaagaattggttaatgaggaaagactaacagaataatgaaaacaaataa 559
Query: 361 tttaaacagaggctaaaggcacaacttttatttctgacaaaagagtaactagggaagggc 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 560 tttaaacagaggctaaaggcacaacttttatttctgacagaagagtaactagggaagggc 619
Query: 421 acacatgaaaatcaaagaagtcatatcatattaaaaagaggatatgttaagatctagtaa 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 acacatgaaaatcaaagaagtcatatcatattaaaaagaggatatattaagatctagtaa 679
Query: 481 gcaaacaatcttgaagtgtgctataattattattttaggtctttatacataaggaaacca 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 680 gcaaacaatcttgaagtgtgctataattattattttaggtctttatatataaggaaacca 739
Query: 541 cggaaagcttccaaggggagtgtggtaggtatgctcctcaatgttcaaccttaaactgag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cggaaagcttccaaggggagtgtggtaggtatgctcctcaatgttcaaccttaaactgag 799
Query: 601 aatgtcaaaaatgaatgcagagagaanaaa-cttgttaatgc 641
|||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 800 aatgtcaaaaatgaatgcagagagaaaaaaacttgttaatgc 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
