Query= MSMg01no475_c18.b1 MSMg01no475_c18.b1 CHROMAT_FILE:
MSMg01no475_c18.b1 PHD_FILE: MSMg01no475_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(546 letters)
>mm_chr11_66617691_66618639
Length = 949
Score = 957 bits (495), Expect = 0.0
Identities = 535/549 (97%), Gaps = 3/549 (0%)
Strand = Plus / Minus
Query: 1 gtaacctgtaattgtatctctatgttgtcttttgttgtgctgcacactgctggatatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gtaacctgtaattgtatctctatgttgtcttttgttgtgctgcacactgctggatatatg 690
Query: 61 acagaggattcttaacgttatgtccaatcagcatacattcatgacatctgtaaaggttat 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 acagaggattcttagcgttatgtccaatcagcatacattcatgacatctgtaaaggttat 630
Query: 121 tgtctcttaaggcagacacatctgtaactttacacatctcagaactgctggctcccagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tgtctcttaaggcagacacatctgtaactttacacatctcagaactgctggctcccagct 570
Query: 181 ttagagatcaagcaatttttggacaggacatagaatacatgtatgaaattgcttttggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttagagatcaagcaatttttggacaggacatagaatacatgtatgaaattgcttttggga 510
Query: 241 ttctctgtattgttttgctt--atagtctgcattcatttcaattcactgaatataacctg 298
|||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 509 ttctctgtattggcatgcttagatagtctgcattcatttcaattcactgaatatatcctg 450
Query: 299 agtacctactgtgctccaaatactgggcataaaagggttcataagatgtggctggcgatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agtacctactgtgctccaaatactgggcataaaagggttcataagatgtggctggcgatc 390
Query: 359 tgtaggagcttttgttccaggagaaaggacaggctgagaaggcttagaatggcatgaatc 418
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 389 tgtaggagcttttgttccaggagaagggacaggctgagaaggcttggaatggcatgaatc 330
Query: 419 tcaggatgtgaccctctgaattttgtttaattttagagagtaccttggagtctctctgtc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tcaggatgtgaccctctgaattttgtttaattttagagagtaccttggagtctctctgtc 270
Query: 479 t-ctttctctctactgcttcagcatggctgttattatttcacttgactttatacctatgc 537
| ||||||||| ||||||||||||||||||| || ||||||||||||||||||||| |||
Sbjct: 269 tcctttctctccactgcttcagcatggctgtgatgatttcacttgactttatacctttgc 210
Query: 538 agtattcct 546
|||||||||
Sbjct: 209 agtattcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 949
Length adjustment: 10
Effective length of query: 536
Effective length of database: 939
Effective search space: 503304
Effective search space used: 503304
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_c18.g1 MSMg01no475_c18.g1 CHROMAT_FILE:
MSMg01no475_c18.g1 PHD_FILE: MSMg01no475_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:51 2005
(369 letters)
>mm_chr11_66401218_66401986
Length = 769
Score = 698 bits (361), Expect = 0.0
Identities = 367/369 (99%)
Strand = Plus / Plus
Query: 1 tccctttgagggacacagcaagcctggaccatgtttagcaagtcccagcctgcagtggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctttgagggacacagcaagcctggaccatgtttagcaagtcccagcctgcagtggtg 260
Query: 61 attattgccttcaaagcaccaccactttgggcatccaatgagatgatgtgccacaggcca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 attattgccttcaaagcaccaccattttgggcatccaatgagatgatgtgccacaggcca 320
Query: 121 ccacacaccctggcacttgatgtggaagagatcggtgacctgttaccaacagagagaaac 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccacacaccctggcacttgatgcggaagagatcggtgacctgttaccaacagagagaaac 380
Query: 181 tgtcaatgtgcaggctaaagaaatagcttgagtcacttcagactcattaacaccatctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcaatgtgcaggctaaagaaatagcttgagtcacttcagactcattaacaccatctgc 440
Query: 241 tatgccatctagacttggtcagctggagaggacgcctaggttattggcaccatggggacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgccatctagacttggtcagctggagaggacgcctaggttattggcaccatggggacc 500
Query: 301 tttcagggatttattttcctgctgttacaccatggatactctttgggaaggacatctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcagggatttattttcctgctgttacaccatggatactctttgggaaggacatctaag 560
Query: 361 tgtgcccat 369
|||||||||
Sbjct: 561 tgtgcccat 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
