Query= MSMg01no477_h12.b1 MSMg01no477_h12.b1 CHROMAT_FILE:
MSMg01no477_h12.b1 PHD_FILE: MSMg01no477_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:55 2005
(625 letters)
>mm_chr11_112966719_112967742
Length = 1024
Score = 1087 bits (562), Expect = 0.0
Identities = 571/574 (99%), Gaps = 1/574 (0%)
Strand = Plus / Plus
Query: 1 gtcttttgtccaaccacacgtgtgcaggctgaagggctcggtcatgttactacctgcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcttttgtccaaccacacgtgtgcaggctgaagggctcggtcatgttactacctgcaac 260
Query: 61 acccaagacacagaaaagcccggccaccaccctgcaggatcgcacctgccccctcctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acccaagacacagaaaagcccggccaccaccctgcaggatcgcacctgccccctcctgca 320
Query: 121 gagactgggcacttctcagaagcacggtgagggatgcctggatgggaggaatggctggca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagactgggcacttctcagaagcacggtgagggatgcctggatgggaggaatggctggca 380
Query: 181 ctttacaagtcttctaataacacagacagcaccagcccggcactacccccaccctggctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttacaagtcttctaataacacagacagcaccagcccggcactacccccaccctggctt 440
Query: 241 tgtgtggcaagagcaaaagagactggaaagggtgagtctgggctacattcaagatccagt 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgtggcaagagcagaagagactggaaagggtgagtctgggctacattcaagatccagt 500
Query: 301 catagtcacgatgcttctccccttattcctcaatggtccagtcagccccagtgacttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catagtcacgatgcttctccccttattcctcaatggtccagtcagccccagtgacttcag 560
Query: 361 acagacctgttagttgctatggctattttaaaaacaaacaaccccccaaaaaaaaataat 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 561 acagacctgttagttgctatggctattttaaaaacaaacaacccccccaaaaaaa-taat 619
Query: 421 tggtctcatgtagcccaagttatccctgaatctgctgcatagccaaggctgctctaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggtctcatgtagcccaagttatccctgaatctgctgcatagccaaggctgctctaaagt 679
Query: 481 tcatggtcctcctgccttagcctcctgagttttgggattaatgaagtgcacaaccatgtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tcatggtcctcctgccttagcctcctgagttttgggattaatgaagtgcacaaccatgtc 739
Query: 541 tggctcagaaacacactctagactacaagcaccc 574
||||||||||||||||||||||||||||||||||
Sbjct: 740 tggctcagaaacacactctagactacaagcaccc 773
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_h12.g1 MSMg01no477_h12.g1 CHROMAT_FILE:
MSMg01no477_h12.g1 PHD_FILE: MSMg01no477_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:55 2005
(194 letters)
>mm_chr11_113167747_113168340
Length = 594
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%)
Strand = Plus / Minus
Query: 1 tggtacagaggcagttaccatgggtaccagttcttgctctggtcctggagatacaggtgc 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 391 tggtacagaggcagttaccatgggtaccagttcttgctctggtccaggagatacaggtgc 332
Query: 61 aataacatcagggcagcttatctcctcaaggtgtgacagacaacggttaaaggaaaggtt 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 331 aataacatcagggcagcttatctcctcaaggtgtgacagacaatggttaaaggaaaggtt 272
Query: 121 ccagctttctcctggctccttgcatggatgcagttcagaggctggcatggtggcaggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ccagctttctcctggctccttgcatggatgcagttcagaggctggcatggtggcaggagc 212
Query: 181 ctcaggcatct 191
|||||||||||
Sbjct: 211 ctcaggcatct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
