Query= MSMg01no477_j22.b1 MSMg01no477_j22.b1 CHROMAT_FILE:
MSMg01no477_j22.b1 PHD_FILE: MSMg01no477_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:06 2005
(581 letters)
>mm_chr11_35367071_35368047
Length = 977
Score = 1050 bits (543), Expect = 0.0
Identities = 570/581 (98%), Gaps = 4/581 (0%)
Strand = Plus / Minus
Query: 1 attccactcctcagttctatggcggcccactgagtcactgcctgtacacagtttgcaatg 60
||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 777 attccactcctcagtcctacggcggcccactgagtcactgcctgtatacagtttgcaatg 718
Query: 61 gagctacttcagagaaactacacagtgggcttatggctttattcttaggctgagacccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gagctacttcagagaaactacacagtgggcttatggctttattcttaggctgagacccaa 658
Query: 121 agagatctctgatactcatagtggggagggactctgctggagagctaggtacaattcaca 180
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 657 agagatctctgatattcatagtggggagggactctgctggagagctagatacaattcaca 598
Query: 181 ccttggcttctctgcgctcacagaaacaagtgtgtgtgtgtgggggggggagggttgttc 240
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 597 ccttggcttctctgtgctcacagaaacaagtgtgtgtgt----gggggggagggttgttc 542
Query: 241 taggatttactaattgagcctccaatcactgatgttagctgaggaatgatgacctgggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taggatttactaattgagcctccaatcactgatgttagctgaggaatgatgacctgggat 482
Query: 301 ccccttccaggctaccctctaactaggcagagacaccggggtggctctttccttggcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccccttccaggctaccctctaactaggcagagacaccggggtggctctttccttggcagt 422
Query: 361 gaacatatgcttggacaggcctaggaaggcagggtgttgtcctcatgcagaatgcaaaat 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaacatatgcttggacgggcctaggaaggcagggtgttgtcctcatgcagaatgcaaaat 362
Query: 421 gttccctccagcaagcccagggatcaagggatgatgctacagacaggacacagagtctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttccctccagcaagcccagggatcaagggatgatgctacagacaggacacagagtctgg 302
Query: 481 cttcactaatttttgtttcctgtctggtaatacagagaagcagacggccataaaaaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcactaatttttgtttcctgtctggtaatacagagaagcagacggccataaaaaagca 242
Query: 541 ttggataaggagccaagaggactgttttctggcctggttct 581
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttggataaggagccaagaggactgttttctggcctggttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 977
Length adjustment: 10
Effective length of query: 571
Effective length of database: 967
Effective search space: 552157
Effective search space used: 552157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_j22.g1 MSMg01no477_j22.g1 CHROMAT_FILE:
MSMg01no477_j22.g1 PHD_FILE: MSMg01no477_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:06 2005
(597 letters)
>mm_chr11_35183474_35184470
Length = 997
Score = 1071 bits (554), Expect = 0.0
Identities = 587/598 (98%), Gaps = 2/598 (0%)
Strand = Plus / Plus
Query: 1 cactcgggtcacccagccgggcagcaacacaatgggattggaggcagcttggacagttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cactcgggtcacccagccgggcagcaacacaatgggattggaggcagcttggacagttct 260
Query: 61 gcaggtgatcagctggctgtttgggtgtttatggctctgggttacaagcggacgctactc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaggtgatcagctggccgtttgggtgtttatggctctgggttacaagcggacgctactc 320
Query: 121 tgggtgatatttctggttctgaagtttagaactctcagatgttgcttttctcagcctcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggtgatatttctggttctgaagtttagaactctcagatgttgcttttctcagcctcag 380
Query: 181 gtactaagaaatatttgtaaaatgacccgcagtattcttaaggctttgatgtatcaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtactaagaaatatttgtaaaatgacccgcagtattcttaaggctttgatgtatcaaagg 440
Query: 241 tggtcactttatttagagtttaaaatatatatatagggatccaacttagaaaagcaagca 300
| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtcacgaaatttagagtttaaaatatatatatagggatccaacttagaaaagcaagca 500
Query: 301 gccatagagccacacctccttccgtgcgtgtctttaaaatgaatgctctcttatcatagt 360
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 501 gccatagagccacacctccttccatgcgtgtctttcaaatgaatgctctcttatcatagt 560
Query: 361 ttctgaacag-ggacagcttcaaggccagagaagatcatctctgcctcggcaggtcagta 419
|||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 561 ttctgaacagagg-cagcttcaaggccagaaaagatcatctctgcctcggcaggtcaata 619
Query: 420 atgttaccagataaagggcaactccttaatgaagaccactcggcctcctgccggcaaagg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgttaccagataaagggcaactccttaatgaagaccactcggcctcctgccggcaaagg 679
Query: 480 agttttcttagtgcatttccagtctcctaacacctcgctccagatcaatggcttttcata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agttttcttagtgcatttccagtctcctaacacctcgctccagatcaatggcttttcata 739
Query: 540 aatgcaccaggaaatctttgaactactaatgcttcaggggctgtttaggtttggagtc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aatgcaccaggaaatctttgaactactaatgcttcaggggctgtttaggtttggagtc 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
