CCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACGCGG
AATTCTTTGCCTAATTTTCCATTCAAATATTTNGGGGTTTTTTGTTTGCT
TTTATATTTTTATTTATTTTAGTGTGTGCGCCAAAAGGAGAACATTCGAG
AATTTAGCTACAGACTGATATGGGCTGGAAGATATGGCAGCCATGCTGTC
TACCTGGCTACCTTCTTTGATCTTCACCAACTTGTAGGTGTGTGTGGCGG
GCATGGTCAAACAAGACCTCAACTGCTTGATCCAGTGCGGTGACATGTCA
CACCCAAATCATCACACTGTACTTTCTTTTTTTTCGTACCCCTGTGTCAC
TGCCCACCTGGTTTATTTTTTTTCCAACCTGCACGAAACCTTTAATTGGA
CTTTATCCTCACCTTTACATCACCCCACTGTGTGTAACGCCTGTTATTCC
ACCCTTTTGCTATTTTCCAACTATGATAATCTGAACGTTTCACCTCATTT
CCCTGTCCACACTTAATTCTACCAACCCTTCCTTGCTCTCCTTGATTCTA
GTTTCAACTTCTCTTTTCTTCTACCCCCGCCCCCTATCGTTATACCCCGC
CTCTTCCTCCCTCCTCTCCCCCCCACATTTCTCCCCTTCCTTATTATTTT
CCCCTTTCTTTATTTTCGATCTTCTATAACTTTTCTTAACATCCACTATA
ATGTTCCCCTCTTCGAAATCAACACATTCATCACCCACCTTATTCTCCAT
TTCTTCTCCGTTTTTATTTCCATCCACCTCCACCTTCTTTTACTATAACA
TTATACTN

AAAAACCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAACACAGAAGTTTGTGA
TACATAATCATTTATTGCATAGTGTATCCTTTGAGATCCACCTGGTTAAG
ATTCTAGAATTTACCTAGTGACTGATATGGGCTGTAAGATATGGCAGCCA
TGCTGTCTACCTGGCTACCTTCTTTGATCTTCACCAGCTTGGGGGTGTGT
GTNGGGGGGGAGGGTCAAACAAGGCCTCAATTGCTTGAGCCAGTGTGGTG
ACATGTCACACCCAAACCATCACACTGTTTTTTCAAGAGTCAGGTACCTC
TGTGTCATTGCTCAGTTGGTAGAACAACCGCATAACATGTAGGAAACCCT
GAATTGGATTTTATCCTCAGCATTGCATAAAATCAGCATGTTAGATGCCT
GTAATTCCAGCATTTGAGAGCTACAAGCAGGAGAATCTGAAGTTCAAGGT
GATTCTTGGCTACAAAGTAAGTTGGAGGGCAGCCTGGGCTACATGAGACT
GTCTTAAAAACCCAGCAAAAAAAAACCTACACAATGGAATATGGGTAAGT
GATGGGGTTGGGCTGGGGCCGCTAGAGCCATTTATTTTCGTCAGTCAAAG
ATGGAGTCTTATTTTGTCTATCTTTCAGATGGTCACTCCTGAACTAAAAT
ATTGGCCTAATCCCACCATCCTGGTTGTGGGCCCACCCCTTTCCGTTGCC
TAATCATCGCACTTTA

Query= MSMg01no477_m23.g1 MSMg01no477_m23.g1 CHROMAT_FILE:
MSMg01no477_m23.g1 PHD_FILE: MSMg01no477_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:21 2005
         (531 letters)



>mm_chr11_63975834_63976763
          Length = 930

 Score =  973 bits (503), Expect = 0.0
 Identities = 524/531 (98%), Gaps = 1/531 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caacacagaagtttgtgatacataatcatttattgcatagtgtatcctttgagatccacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacacagaagtttgtgatacataatcatttattgcatagtgtatcctttgagatccacc 260

                                                                       
Query: 61  tggttaagattctagaatttacctagtgactgatatgggctgtaagatatggcagccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttaagattctagaatttacctagtgactgatatgggctgtaagatatggcagccatg 320

                                                                       
Query: 121 ctgtctacctggctaccttctttgatcttcaccagcttgggggtgtgtgtngggggggag 180
           |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 321 ctgtctacctggctaccttctttgatcttcaccagcttgggggtttgtgt-gggggggag 379

                                                                       
Query: 181 ggtcaaacaaggcctcaattgcttgagccagtgtggtgacatgtcacacccaaaccatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtcaaacaaggcctcaattgcttgagccagtgtggtgacatgtcacacccaaaccatca 439

                                                                       
Query: 241 cactgttttttcaagagtcaggtacctctgtgtcattgctcagttggtagaacaaccgca 300
           |||||   ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 440 cactggagtttcaagagtcaggtacctctgtgtcattgctcagttggtagagcaaccgca 499

                                                                       
Query: 301 taacatgtaggaaaccctgaattggattttatcctcagcattgcataaaatcagcatgtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taacatgtaggaaaccctgaattggattttatcctcagcattgcataaaatcagcatgtt 559

                                                                       
Query: 361 agatgcctgtaattccagcatttgagagctacaagcaggagaatctgaagttcaaggtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agatgcctgtaattccagcatttgagagctacaagcaggagaatctgaagttcaaggtga 619

                                                                       
Query: 421 ttcttggctacaaagtaagttggagggcagcctgggctacatgagactgtcttaaaaacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcttggctacaaagtaagttggagggcagcctgggctacatgagactgtcttaaaaacc 679

                                                              
Query: 481 cagcaaaaaaaaacctacacaatggaatatgggtaagtgatggggttgggc 531
           |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cagcaaaacaaaacctacacaatggaatatgggtaagtgatggggttgggc 730


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 930
Length adjustment: 10
Effective length of query: 521
Effective length of database: 920
Effective search space:   479320
Effective search space used:   479320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)