Query= MSMg01no478_o09.b1 MSMg01no478_o09.b1 CHROMAT_FILE:
MSMg01no478_o09.b1 PHD_FILE: MSMg01no478_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:42 2005
(430 letters)
>mm_chr11_68780154_68780975
Length = 822
Score = 644 bits (333), Expect = 0.0
Identities = 403/435 (92%), Gaps = 18/435 (4%)
Strand = Plus / Minus
Query: 1 acacgctcagtaatttactgggaagtttggagttgacagaactcttcccacttccctgag 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 506 acacgctcagtaatttactgggaagtctggagttgacagaactcttcccacttccccgag 447
Query: 61 gtc----ttttcagctttctttggtgacgttcaggtcaggatgcacgttgagcatcttct 116
||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 446 gtccccg----cagctttctttggtgacgttcaggtcag-------gttgagcatcttct 398
Query: 117 gatggcttttcattttttttttattcagccncattanactttgttcctcaaacataccta 176
|||||||||||| || | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 397 gatggcttttcaagttgtccctattcagcctcattctactttgttcctcaaacataccta 338
Query: 177 tttttaggaatacctcaaaaaacattcctattgttcttagctagtggttaatttccctac 236
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttttaggaatacctc-aaaaacattcctattgttcttagctagtggttaatttccctac 279
Query: 237 ttcacgagt-ctggaaactctagaagcttgggggtgggagagaggcagatctgagtctta 295
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttcacga-tactggaaactctagaagcttgggggtgggagagaggcagatctgagtctta 220
Query: 296 ggttgtttgccagacaactttgctgtttgtagcatttaggagcctcaaactcaaaatcct 355
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 219 ggttgtttgccagacaactttgctgtgtgtagcctttaggagcctcaaactcaaaatcct 160
Query: 356 cctgcctcagcatgtggagtgctgaagatttccagcccgctgccctactgggtgacacca 415
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 159 cctgcctcagcatgtggagtgctgaagatttccagcctgctgccctactgggtgacacca 100
Query: 416 cacttggcttcacac 430
|||||||||||||||
Sbjct: 99 cacttggcttcacac 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 822
Length adjustment: 9
Effective length of query: 421
Effective length of database: 813
Effective search space: 342273
Effective search space used: 342273
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_o09.g1 MSMg01no478_o09.g1 CHROMAT_FILE:
MSMg01no478_o09.g1 PHD_FILE: MSMg01no478_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:43 2005
(239 letters)
>mm_chr11_68611478_68612116
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Plus
Query: 1 tgcagacaaaagcagtgcttttaatggagtgttgtgagacagccgctgaggaattcctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcagacaaaagcagtgcttttaatggagtgttgtgagacagccgctgaggaattcctcc 260
Query: 61 ttccccactcctagttcaaagccaacctggagaagaacaaacagggcctggagacagaca 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcccctctcctagttcaaagccaacctggagaagaacaaacagggcctggagacagaca 320
Query: 121 acaaggagctggcgtgtgaggtgaaggtgctgcagcaggtgaaggcggagtcagagcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaggagctggcgtgtgaggtgaaggtgctgcagcaggtgaaggcggagtcagagcaca 380
Query: 181 agaggaagaagctggatgcccaggtccaggagctccatgccaaggtgtcagagggtgac 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaggaagaagctggatgcccaggtccaggagctccatgccaaggtgtcagagggtgac 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
