Query= MSMg01no479_i24.b1 MSMg01no479_i24.b1 CHROMAT_FILE:
MSMg01no479_i24.b1 PHD_FILE: MSMg01no479_i24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:37 2005
(592 letters)
>mm_chr11_87956066_87957057
Length = 992
Score = 1145 bits (592), Expect = 0.0
Identities = 592/592 (100%)
Strand = Plus / Plus
Query: 1 tatagacttctaccgtaactcatgttctgtaatgcttggtctctgtgaaaaaaaaaagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tatagacttctaccgtaactcatgttctgtaatgcttggtctctgtgaaaaaaaaaagag 260
Query: 61 agagattttttttttcctaatgcatttcaaatgctatttacatattagtttatttaccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagattttttttttcctaatgcatttcaaatgctatttacatattagtttatttaccac 320
Query: 121 ctttctttggctaggtatttttgtggtggtgttggggatcaaatccaggagggcttcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttctttggctaggtatttttgtggtggtgttggggatcaaatccaggagggcttcatg 380
Query: 181 aactgcaggctcagggaggggtggggcagggaccctacctagaggaagcttcttcttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgcaggctcagggaggggtggggcagggaccctacctagaggaagcttcttcttcaa 440
Query: 241 caggcaaattgtaaggacaaaaagagatcggggagaagcagcaaattaaagtggacttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcaaattgtaaggacaaaaagagatcggggagaagcagcaaattaaagtggacttaa 500
Query: 301 aaataagcaatggagttggtcggacgtggtgcacccagcacatggtaatcccagcactaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaataagcaatggagttggtcggacgtggtgcacccagcacatggtaatcccagcactaa 560
Query: 361 cacagcagagacaggaggactgtgtgttcaagaccagcctttaactatatatggagtgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacagcagagacaggaggactgtgtgttcaagaccagcctttaactatatatggagtgaa 620
Query: 421 aagctagcctgggctaaaggtgaccctgtgtcaagcaagcttgtaagcagacaaacaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagctagcctgggctaaaggtgaccctgtgtcaagcaagcttgtaagcagacaaacaaat 680
Query: 481 aggcaaggcaaccagttctctccctacaccttccccacaggaaaggaatacactaacgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggcaaggcaaccagttctctccctacaccttccccacaggaaaggaatacactaacgga 740
Query: 541 cagagtaaagtcctctgccctgggaagcacccttgacagacaatggcaggga 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagagtaaagtcctctgccctgggaagcacccttgacagacaatggcaggga 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_i24.g1 MSMg01no479_i24.g1 CHROMAT_FILE:
MSMg01no479_i24.g1 PHD_FILE: MSMg01no479_i24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:37 2005
(556 letters)
>mm_chr11_88068718_88069672
Length = 955
Score = 764 bits (395), Expect = 0.0
Identities = 398/399 (99%), Gaps = 1/399 (0%)
Strand = Plus / Minus
Query: 158 ttgtgaatgagacccgaagactccgtccctcgggcatgggaggacacaatgagaagaagt 217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 ttgtgaatgagacccgaagactccgtccctcgggcatgggaggacacaatgagaagaagt 896
Query: 218 catcggaagctggcctttgtgagacactgaatctcttgatcttgaacttgtcagccttca 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 catcggaagctggcctttgtgagacactgaatctcttgatcttgaacttgtcagccttca 836
Query: 278 cagccaagagatcaaggtctgttgtttagaagccacccagtctacagcatgctcttctca 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cagccaagagatcaaggtctgttgtttagaagccacccagtctacagcatgctcttctca 776
Query: 338 gagccagaatagactaatacgggtgctaagagcatccttgactccatgaagacagaatag 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gagccagaatagactaatacgggtgctaagagcatccttgactccatgaagacagaatag 716
Query: 398 gaagcaagcgtgaatcacctcatccgtagagtcaggaaagcgaaggggtctggagctaca 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gaagcaagcgtgaatcacctcatccgtagagtcaggaaagcgaaggggtctggagctaca 656
Query: 458 gatgctccaagtgcagtggtctcagctcaaccacaagccaccttggtccctgtacactca 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gatgctccaagtgcagtggtctcagctcaaccacaagccaccttggtccctgtacactca 596
Query: 518 gtcttctgccactgagaacccggggggnttgggagtttg 556
||||||||||||||||||||||||||| |||||||||||
Sbjct: 595 gtcttctgccactgagaacccgggggg-ttgggagtttg 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 955
Length adjustment: 10
Effective length of query: 546
Effective length of database: 945
Effective search space: 515970
Effective search space used: 515970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
