Query= MSMg01no479_k15.b1 MSMg01no479_k15.b1 CHROMAT_FILE:
MSMg01no479_k15.b1 PHD_FILE: MSMg01no479_k15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:44 2005
(642 letters)
>mm_chr11_118819050_118820086
Length = 1037
Score = 1168 bits (604), Expect = 0.0
Identities = 631/642 (98%), Gaps = 5/642 (0%)
Strand = Plus / Minus
Query: 1 gtggcaagtgcctgtacctgctggctgagccatcccactgggcctgtgtttgataccccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gtggcaagtgcctgtacctgctggctgagccatcccactgggcctgtgtttgataccccc 778
Query: 61 taaaataaaacagaaggaaaggaattgtgacccagaaaggggtaggccagaggaacaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 taaaataaaacagaaggaaaggaattgtgacccagaaaggggtaggccagaggaacaagg 718
Query: 121 gtatgtcatctcagctgccatcttcggaacctgggtcctggcctagtgaccaaccccagc 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 717 gtatgtcatctcagctgccatcttcggaacctgggtcctggcctagtgcccaaccccagc 658
Query: 181 ctcctcaaaaggtccagtttcagactctggtctgtcaccatcatgggactcctgtggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctcctcaaaaggtccagtttcagactctggtctgtcaccatcatgggactcctgtggagt 598
Query: 241 atgctggtgatatggttatgagctgtccccagctgggctgggctgtctgctcgctcttgc 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 atgctggtgaca-ggttatgagctgtccccagctgggctgggctgtctgctcgctcttgc 539
Query: 301 atgctggctcctgtataccttttgtcccccctgctatggctgtggggttcactttagtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 atgctggctcctgtataccttttgtcccccctgctatggctgtggggttcactttagtgt 479
Query: 361 cttcccgctatctgcctcacctcacaaagagaccgtaaggtagttaatacctgagttccc 420
|||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||
Sbjct: 478 cttcccgctatctgcctcacttctcaaagagatcgtaaggtagttaatacctgagttccc 419
Query: 421 acagccccttgcaggggtttgcaccagggtcaccaaacatgaaaggggcatttctcccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 acagccccttgcaggggtttgcaccagggtcaccaaacatgaaaggggcatttctcccca 359
Query: 481 gctcccttgtccttcatggtctgggtgacagcccatccaggggggagactgaatattgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gctcccttgtccttcatggtctgggtgacagcccatccaggggggagactgaatattgtt 299
Query: 541 gtcatgtgtcacttagaatcacctgagctcttggacagacccctccttttgtccatgcta 600
|||| |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gtcacgtgtca----gaatcacctgagctcttggacagacccctccttttgtccatgcta 243
Query: 601 tggccagggtatggcaggtatgggcgtcagctcctaacttgc 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tggccagggtatggcaggtatgggcgtcagctcctaacttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1037
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1027
Effective search space: 649064
Effective search space used: 649064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_k15.g1 MSMg01no479_k15.g1 CHROMAT_FILE:
MSMg01no479_k15.g1 PHD_FILE: MSMg01no479_k15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:44 2005
(422 letters)
>mm_chr11_118679961_118680782
Length = 822
Score = 768 bits (397), Expect = 0.0
Identities = 416/425 (97%), Gaps = 6/425 (1%)
Strand = Plus / Plus
Query: 1 agagtgtatcctgtgtggcccttcagcagtgcagggtcaggtggggatatggacagccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgtatcctgtgtggcccttcagcagtgcagggtcaggtggggatatggacagccaa 260
Query: 61 tggacatgatagaacatacagtggacagagtaaggccgggaggccagctaggctctccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggacatgatagaacatacagtggacagagtaaggccgggaggccagctaggctctccct 320
Query: 121 gtccttgcctcaaggccccaggcacaatgcataccaaagagcaaggcctttctgccacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccttgcctcaaggccccaggcacaatgcataccaaagagcaaggcctttctgccacac 380
Query: 181 aactgtggagttncatc---ctttgctgtcactgcagagcacttgggccaggctggcgat 237
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aactgtggag---catcaccctttgctgtcactgcagagcacttgggccaggctggcgat 437
Query: 238 tgcagctcagagcacgtgcacacctttggtggacacatgaggaaggtctgggtgccgtga 297
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 438 tgcagctcagagcacgagcacacctttggtggacacatgaggaagggctgggtgccgtga 497
Query: 298 acagctttctgaatgaaggagcatcagagctgtgaacctactcatgcaggtgccctgcct 357
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 498 acagctttctgaatgaaggagcatcagagctgtgaacctactcatgcaggtggcctgcct 557
Query: 358 gagctatgcagatgtcaggtccacacagctgaccacctcactacagagctccagccagaa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gagctatgcagatgtcaggtccacacagctgaccacctcactacagagctccagccagaa 617
Query: 418 ggccc 422
|||||
Sbjct: 618 ggccc 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
