NNNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTATAGATTCTCTACCCTCTTTCCATTTTACTCACAGCT
TCATCTCCAGCTCTTTTTCCATCACACCTGGACTATCAGAAAACCTGCTC
CCTACATTACGTGCTGAAAACCATCCCTCTTGATTTCTGCTAGATTTATT
CTTCAAAAAAATTCTGATATTGTCATGTTATTCTATGAGCAACTCTTATA
GAACCAACAGGTGTCACACATGGAATGGAAATCTTCTTAAAATTTGCCCC
TAGGAAATTATTTTGGTTTGTTTTAATCCTGTTTTCTTCTTGGCCCTGGC
GTTACCCTGTACTGGGGCATATAAAGTTTGCAAGACCAAGGGGCCTCTCT
TCCCAATGATGGCCCACTAGGCTATCTTCTGCTACATATGCAAATTTGTG
TTTGATACACACCTTTAATCCCAAACAATGAAGGTAAGTTTACCTTGTAG
AAAGAAGCACCCTTGTTGGAAAGTGGTGTCTTAGTAAGTGCCAGGCAAAG
TGACAAATCAGAGAAGGATTTGCCAAATAGACTATGCCCAACTCTCAGGA
GAAAAGAGAGGCTGCTTAAAAGAGATCAGTGCAGAAGTGAAGGAGACAAT
GGTCCAGAGACAGTTTGCAGAGAGAACAAGCTGGACACAGGTGAAGACAG
AAAGAGCCAGAGAGTGAAAAGGAGCCAGAAGATTGGGACGAATTGCCAAA
GCTAGTATGAG

TTTTCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTT
TTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTAAGTTCTTTA
TTTATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCT
TTCCCAATCTGTTGGTGGTCTTTTTGTCATATTGACGGTGTCTTTTGCCT
TGCAGTAGCTTTGGAGTTTCATGAGGTCCCATTTGTCAATTCTCGATCTT
ACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTGCCCCA
TATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCT
GGTTTTATGTGAAGTTCCTTGATACACTTAGATTTGACCTTAGTACTAGG
AGATAGGTATGGATCGATTCGCAGTCTTCTACATGATAACAACCAGTTGT
GCCAGCACCATTTGTTGAAAATGCTGTCTTTCTTCCATTGGATGGTTTTA
GCTTCCTTGTCGAATATCAAGTGACCATAAGTGTGTGGGTTCATTTCTGG
GTCTTCAATTCTATTCTATTGGTCTACTTGTCTGTCAGTAATACCCCAGG
AACCCTGGGGCGGTTTTTTATCCCCCAATTGGTCTCCGGGAAAAAACTCT
TTTTGGGCCCGGCCNCGGGGGGTTTTCCCCCCCGAAGAGGTTTTTTTT

Query= MSMg01no479_n03.b1 MSMg01no479_n03.b1 CHROMAT_FILE:
MSMg01no479_n03.b1 PHD_FILE: MSMg01no479_n03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:57 2005
         (638 letters)



>mm_chr11_37784266_37785302
          Length = 1037

 Score =  890 bits (460), Expect = 0.0
 Identities = 478/484 (98%), Gaps = 1/484 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttatagattctctaccctctttccattttactcacagcttcatctccagctct 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggaattcttatagattctctaccctctttccattttactcacagcttcatctccagctct 424

                                                                       
Query: 64  ttttccatcacacctggactatcagaaaacctgctccctacattacgtgctgaaaaccat 123
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 423 ttttccatcacacctggactatcacaaaacctgctccctacattacctgctgaaaaccat 364

                                                                       
Query: 124 ccctcttgatttctgctagatttattcttcaaaaaaattctgatattgtcatgttattct 183
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 363 ccctcttgatttctgctagatttattcttcaaaaaaattctgataatgtcatgttattct 304

                                                                       
Query: 184 atgagcaactcttatagaaccaacaggtgtcacacatggaatggaaatcttcttaaaatt 243
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atgagaaactcttatag-accaacaggtgtcacacatggaatggaaatcttcttaaaatt 245

                                                                       
Query: 244 tgcccctaggaaattattttggtttgttttaatcctgttttcttcttggccctggcgtta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgcccctaggaaattattttggtttgttttaatcctgttttcttcttggccctggcgtta 185

                                                                       
Query: 304 ccctgtactggggcatataaagtttgcaagaccaaggggcctctcttcccaatgatggcc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ccctgtactggggcatataaagtttgcaagaccaaggggcctctcttcccaatgatggcc 125

                                                                       
Query: 364 cactaggctatcttctgctacatatgcaaatttgtgtttgatacacacctttaatcccaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 cactaggctatcttctgctacatatgcaaatttgtgtttgatacacacctttaatcccaa 65

                                                                       
Query: 424 acaatgaaggtaagtttaccttgtagaaagaagcacccttgttggaaagtggtgtcttag 483
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64  aaaatgaaggtaagtttaccttgtagaaagaagcacccttgttggaaagtggtgtcttag 5

               
Query: 484 taag 487
           ||||
Sbjct: 4   taag 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space:   644956
Effective search space used:   644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)