XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAAATCGCGGGAAT
TCTTTCACCCATGCCGGAAATAACGAGGAAATTTATGTAGACTTAATTTC
ATGCCTTCATATGTCCATTATTTATATTGTTGTTGTTAAACATCTCTTGA
GAGACAACTGAGTAATGATGTACCCACGAGGTAGAGGTAGCCAGCCCTTG
CTGAACCTAAATAAATAACGAGCCCCAAGGAAGGATGAGGAGTACACAGG
TAGCCATGGTCAGCCATAGGAGGGCAACAGCAGCAACAGCAGCAGCTCTC
TGTCACTTCCTGAAGCTCTGTTTTTAAGAAAAACTAGATTAGGTATTATG
AGAAAACCAGGGACAATAACCATGGAAGCCCTTCAGTCATTCCAGACAGT
TGACTTCTAGACAAACTATGATAGAATGTTTGTAATGCATAACTAATCAT
GAAACCAAGTAAAAAGAATTGCTAAGTGTCAGAAGAAAGTGGAAAACTCA
GAAATGAAACTTGTACTTTGACTAGGCAAGTTGTAAATTGAGCTAGGTAT
GGTGTTTCCTATAATCCTAACATTTTGGGTGCTGAGGCAAGGGAATTACC
ATAGGTTCAGGGACAGCCTGGGATATAGAGTGAGTCCAGGCTATCCTGGG
CTAACCAGTAACCCAGTCTCTAAAAGCAAATCTGAATACACATTATCTGT
AAAAGGTTGATTCTACACTGTGGTACTAGTCAGCTCACTCTGTCAATGGC
AN

TGTGTGAGGCCTGGNGGCGCCTGGCTTTTCAAACTAGTGACCTATAGAAG
GACTGCCGTAATCTTTACTCAAGAATGTTCCTGTGGGTGGAGAATGGAAC
TTGGCCTATCCTTGACCCCAGATAGGAGGGGGAAAGGTGTAAGGAGGGTG
TGGGACTGAAAAAGCCCCTCAGAACACTTTACAAAGCATCAAGCATCTAC
TTTAGTAAGAACAATTAAAGACTTTTGTGAGGTTGATTTAACTTGTCCAG
TCTGATGAGTTCTGGTCCTGGAACTCACTCAGTGAAAGGAGAGAACCAGT
TCCTACAAGATGGTCTCTGATCTCCATACTGGAGCCATGGCATACACATG
CCCCTTTACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACACACACTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGATGCAGTTTTAAAAGACAAAAGAAGAAAATTTGCATCAAATTAAA
GGGAATTAAAGAAACATTACCACTAAATGTGTCTCCAGAGTCTAGACAAC
AATAATGGGTATGGGTGAAGTAATCCTGGCCAAATTTGAAAAAGTGTACG
TCTTATATTCGGTTTCTCTGCTGTTTGAATGCTGCCAGCACACTGCCAAG
TCTAATTGTGAGTCCTTGGTCCTGCAGTTTCCCTCTGGGGTATCAGACAT
CTCTGTATGCCAGACTGAGGATGGGGAAATACCTCCTGTTATGCGTAATN

Query= MSMg01no481_i14.b1 MSMg01no481_i14.b1 CHROMAT_FILE:
MSMg01no481_i14.b1 PHD_FILE: MSMg01no481_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:12 2005
         (667 letters)



>mm_chr11_20833960_20835026
          Length = 1067

 Score = 1243 bits (643), Expect = 0.0
 Identities = 658/663 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gaaatttatgtagacttaatttcatgccttcatatgtccattatttatattgttgttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaaatttatgtagacttaatttcatgccttcatatgtccattatttatattgttgttgtt 604

                                                                       
Query: 61  aaacatctcttgagagacaactgagtaatgatgtacccacgaggtagaggtagccagccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aaacatctcttgagagacaactgagtaatgatgtacccacgaggtagaggtagccagccc 544

                                                                       
Query: 121 ttgctgaacctaaataaataacgagccccaaggaaggatgaggagtacacaggtagccat 180
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 543 ttgctgaacctaaataaataacgagccccaaggaaggatgaggagtacccaggtagccat 484

                                                                       
Query: 181 ggtcagccataggagggcaacagcagcaacagcagcagctctctgtcacttcctgaagct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggtcagccataggagggcaacagcagcaacagcagcagctctctgtcacttcctgaagct 424

                                                                       
Query: 241 ctgtttttaagaaaaactagattaggtattatgagaaaaccagggacaataaccatggaa 300
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ctgttaataagaaaaactagattaggtattatgagaaaaccagggacaataaccatggaa 364

                                                                       
Query: 301 gcccttcagtcattccagacagttgacttctagacaaactatgatagaatgtttgtaatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcccttcagtcattccagacagttgacttctagacaaactatgatagaatgtttgtaatg 304

                                                                       
Query: 361 cataactaatcatgaaaccaagtaaaaagaattgctaagtgtcagaagaaagtggaaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cataactaatcatgaaaccaagtaaaaagaattgctaagtgtcagaagaaagtggaaaac 244

                                                                       
Query: 421 tcagaaatgaaacttgtactttgactaggcaagttgtaaattgagctaggtatggtgttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcagaaatgaaacttgtactttgactaggcaagttgtaaattgagctaggtatggtgttt 184

                                                                       
Query: 481 cctataatcctaacattttgggtgctgaggcaagggaattaccataggttcagggacagc 540
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 cctgtaatcctaacattttgggtgctgaggcaagggaattaccataggttcagggacagc 124

                                                                       
Query: 541 ctgggatatagagtgagtccaggctatcctgggctaaccagtaacccagtctctaaaagc 600
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 123 ctgggatatagagtgagtccaggctatccttggctaaccagtaacccagtctctaaaagc 64

                                                                       
Query: 601 aaatctgaatacacattatctgtaaaaggttgattctacactgtggtactagtcagctca 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  aaatctgaatacacattatctgtaaaaggttgattctacactgtggtactagtcagctca 4

              
Query: 661 ctc 663
           |||
Sbjct: 3   ctc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)