ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAAAAAAATTACAGCAAAAAAAAAAAAACAAAAAACAATCACGTAAGT
GAAAAGTGAGCTTGGTCAGAAAATGTCACACACAAATAAACAGCAAAGAC
TAACATGAAAAAGCTATATACCAACTGTTACATATCAAAGTAGTACAACC
CAACTAAAAAGCAGAAAAATATTAGAACAGCCATTGCAGGAAGTCATAGA
ACTGAGAGATACTACTGCTCTTACTGGTAAAACATTTGTCTCACATGTAC
ATGGCTTCAGCAAATGAGGGAGGGAGAAGAAAGAAAAAGTGTTATTTGGT
TTCACTATTAAACTACAAATACTTACTAAATTGATAGAAATGACAATATA
TTACAATGTAAAATATGGATGTAGAGAATAAGCCTCTGTCACCCGGGGAT
ACACATCCAGCATGCACTTGTCATTGTTTAGGAGAAGTAAAGACATAACA
AGGTTACACATCACCTGTATGATCTCAGGGAAGACACTGCAGAACTGAGG
CACATGTGTACAAAAGGCTCATGGTTACATGGTTAGAGACAAAAACTGCT
AGTCATGTTCCAGTAAGAGCAGAACACATTAACTAATAAATTCATAAATA
GCAGAGCACTTTAAATGGGAGGAAATAAACCATAATATTTTACTTGAGAA
ATAACACCAAGGGATATATTTTAACACATAGCTGGAAGACAGACAAACCT
TAAG

ATAAGTGGTAGCCTGGCGGCCGCCTGGCCTCAAAAAAGGTGACACAAGAA
GGATCCCAAAAACTTGGGAATTACAGGTATGGAATGTGTGCTTGTGTGTG
TGTATGTGTGCCTGTATGTGTGTGTGTGTGTCGTACCACAAACCAACCCC
CCCCCCCCAACCACCCAACCCCCAAACCCACACACAACAACCACACCCAA
AAACACCCCCCACCACACCCCCACACACACCCAAAAAACCCCCCCTCCTC
CCACCAACCACAAAAAATATAAACCTACCAAATACCCAACCACACCAAAA
CAAACAACAACCCCACCTTTTTTTATCCATCAACCACCAACCACCCAACC
CAACAAACACACCCACCAAAAACACAACAAACAAAACACCAAAACACCAA
ACCCAAACCAATCCAACACCCCCCCCCCCACCTACAAAAACCACACACCC
CACACCCCAAACACCCCCCCACACACCATCACCAACCCCAATCCTCAAAA
ACCACATCTCCACAACACACAACTCCTCCCACCCAACACACCAACCCCCC
CAAAAAAAACCACCACCCACAACCCACCAATAACCAACACAACCACACAA
ACCACCACACACCAAAAACTATACCCCCCACACACCAACTCCATCACCCC
CCCATACAAATCACAAACACCCACCCACACACAAACCAAATACCCCACCC
CACACCTAACACTACACCTCACCCCATAACAAAACCACAAAAAACCCCCA
ACCCCAAACCCACTACTCACCCCCCAATATATTCCATACCTCAACCTACC
AAACACACATACACACACCACAACAACACACACAAACCCCCCACTCCACC
CTCACCT

Query= MSMg01no481_k18.b1 MSMg01no481_k18.b1 CHROMAT_FILE:
MSMg01no481_k18.b1 PHD_FILE: MSMg01no481_k18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:23 2005
         (710 letters)



>mm_chr11_26838857_26839964
          Length = 1108

 Score = 1305 bits (675), Expect = 0.0
 Identities = 700/709 (98%), Gaps = 6/709 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccaaaaaaattacagcaaaaaaaaaaaaacaaaaaacaatcacgtaagtgaaaa 63
           |||||||||||||||  | | ||||||| |||||||||||||||||||||||||||||||
Sbjct: 908 ggaattccaaaaaaa--a-aacaaaaaacaaaaaacaaaaaacaatcacgtaagtgaaaa 852

                                                                       
Query: 64  gtgagcttggtcagaaaatgtcacacacaaataaacagcaaagactaacatgaaaaagct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gtgagcttggtcagaaaatgtcacacacaaataaacagcaaagactaacatgaaaaagct 792

                                                                       
Query: 124 atataccaactgttacatatcaaagtagtacaacccaactaaaaagcagaaaaatattag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 atataccaactgttacatatcaaagtagtacaacccaactaaaaagcagaaaaatattag 732

                                                                       
Query: 184 aacagccattgcaggaagtcatagaactgagagatactactgctcttactggtaaaacat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aacagccattgcaggaagtcatagaactgagagatactactgctcttactggtaaaacat 672

                                                                       
Query: 244 ttgtctcacatgtacatggcttcagcaaatgagggagggagaagaaagaaaaagtgttat 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttgtctcacatgtacatggcttcagcaaatgagggagggagaagaaagaaaaagtgttat 612

                                                                       
Query: 304 ttggtttcactattaaactacaaatacttactaaattgatagaaatgacaatatattaca 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttggtttcactattaaactacaaatacttactaaattgatagaaatgacaatatattaca 552

                                                                       
Query: 364 atgtaaaatatggatgtagagaataagcctctgtcacccggggatacacatccagcatgc 423
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atgtaaaatatggatgtggagaataagcctctgtcacccggggatacacatccagcatgc 492

                                                                       
Query: 424 acttgtcattgtttaggagaagtaaagacataac-aaggttacacatcacctgtatgatc 482
           ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 491 acttgtcattgtttaggagaagtaaagacat-acaaaggttacacatcacctgtatgatc 433

                                                                       
Query: 483 tcagggaagacactgcagaactgaggcacatgtgtacaaaaggctcatggttacatggtt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcagggaagacactgcagaactgaggcacatgtgtacaaaaggctcatggttacatggtt 373

                                                                       
Query: 543 agagacaaaaactgctagtcatgttccagtaagagcagaacacattaactaataaattca 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agagacaaaaactgctagtcatgttccagtaagagcagaacacattaactaataaattca 313

                                                                       
Query: 603 taaatagcagagcacttt-aaatgggaggaaataaaccataatattttacttgagaaata 661
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 taaatagcagagcactttgaaatgggaggaaataaaccataatattttacttgagaaata 253

                                                            
Query: 662 acaccaagggatatattttaacacatagctggaagacagacaaacctta 710
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acaccaagggatatattttaacacatagctggaagacagacaaacctta 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 710
Length of database: 1108
Length adjustment: 10
Effective length of query: 700
Effective length of database: 1098
Effective search space:   768600
Effective search space used:   768600
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)