Query= MSMg01no482_e09.b1 MSMg01no482_e09.b1 CHROMAT_FILE:
MSMg01no482_e09.b1 PHD_FILE: MSMg01no482_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:09 2005
(574 letters)
>mm_chr11_68403491_68404464
Length = 974
Score = 994 bits (514), Expect = 0.0
Identities = 559/574 (97%)
Strand = Plus / Plus
Query: 1 tctcctctagccctggttgatgccagtctggactgtcagaagcatttaacatatggttcc 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctcctctagccctggtcgatgccagtctggactgtcagaagcatttaacatatggttcc 260
Query: 61 attactactgtcatggactttgtaggaagagagggctaccacctttcagcggacagctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 attactactgtcatggactttgtaggaagagagggctaccacctttcagcgaacagctgg 320
Query: 121 agaaacagaagcactatgtaccaaatcaggagaccatgtggaattcccagtcccggctga 180
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaaacagaggtactatgtaccaaatcaggagaccatgtggaattcccagtcccggctga 380
Query: 181 gccatctgccccgtgacaaatggccaccactaaaatcagaaatcacaaaagctctgccaa 240
||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 381 gccatctgccctgtgacaaatggccaccactaaaatcagaaagcgcaaaagctctgccaa 440
Query: 241 aggctttttgcttccactcagtctttgttggctttcttggatgcaagcttgatcttcctc 300
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcttcctgcttccactcagtctttgttggctttcttggatgcaagcttgatcttcctc 500
Query: 301 cacctccctctttctgtgtgttctcttcccatccccgcccccctatgaagcccagagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacctccctctttctgtgtgttctcttcccatccccgcccccctatgaagcccagagaca 560
Query: 361 aactcccacagaagcagaatttcctgcttgtccttcctaaggccacctcttgaccttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactcccacagaagcagaatttcctgcttgtccttcctaaggccacctcttgaccttgag 620
Query: 421 ctgaattactgaactcacagcctcctcaggccacagaagccgctcagctttactaaggcc 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 621 ctgaattactgaactcacagcctcctcaggccacagaagcccctcagctttactaagtcc 680
Query: 481 tttcacttaacgaaaacctcaccaagttcttttctttcacaccctggttccaacatgggc 540
|||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 681 cttcacttaacgaaaacctcaccaagtccttttctttcacaccccgtttccaacatgggc 740
Query: 541 aacccagcaagctctgcctgccctctggtgatct 574
||||||||||||||||||||||||||||||||||
Sbjct: 741 aacccagcaagctctgcctgccctctggtgatct 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_e09.g1 MSMg01no482_e09.g1 CHROMAT_FILE:
MSMg01no482_e09.g1 PHD_FILE: MSMg01no482_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:09 2005
(571 letters)
>mm_chr11_68586771_68587738
Length = 968
Score = 1027 bits (531), Expect = 0.0
Identities = 560/571 (98%), Gaps = 3/571 (0%)
Strand = Plus / Minus
Query: 1 cctctgagcacttctgtaatcaagcaaagatcgtacttgtgtgtgttaagtggcactctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 cctctgagcacttctgtaatcaagcaaagatcgtacttgtgtgtgttaagtggcactctc 709
Query: 61 tccacacatggccccccactgtaagtttcatcctcagtgacccttcatgggctcgtgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tccacacatggccccccactgtaagtttcatcctcagtgacccttcatgggctcgtgtca 649
Query: 121 ctccagccaccatccccaccctcacctacagaatttttatcctaaaacccgatcctctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctccagccaccatccccaccctcacctacagaatttttatcctaaaacccgatcctctct 589
Query: 181 agttatctgcaactagagaagcatggaaggaggacgctcagagagctgggagaaaagaca 240
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 588 agttatctgcaactggagaagcacggaaggaggacgctcagagagctgggagaaaagaca 529
Query: 241 aagactaatgcagatttcccagagttgtcacttttcgacaagtctgttgtgggcagggga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aagacaaatgcagatttcccagagttgtcacttttcgacaagtctgttgtgggcagggga 469
Query: 301 cgcatcttttatgcttccaaagggttttgaatggcagtttgggcaacgaaaagagagaga 360
|||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 468 tgcatcttttatgcttccaaagggttttgaatggcagtttgggtaaggaaaagagagaga 409
Query: 361 aggatttaacctttcgtactaagctgtcagtctccaggcctttataggccctttctcacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 aggatttaacctttcgtactaagctgtcagtctccaggcctttataggccctttctcacc 349
Query: 421 cctcacctcctgcagccctcacttctagcaggttcccccagctacccaggagacagccac 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 348 cctcacctcctgcagccctcacttctagcgggttcccccagctacccaggagacagccac 289
Query: 481 tttatctacattagactgaacagatctatgctgatgctctttgttcaatgaagtctaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tttatctacattagactgaacagatctatgctgatgctctttgttcaatgaagtctaagc 229
Query: 541 actcctgcatctggggcaggttactagggtt 571
| ||||||||||| |||||||||||||||
Sbjct: 228 a---ctgcatctgggtcaggttactagggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 968
Length adjustment: 10
Effective length of query: 561
Effective length of database: 958
Effective search space: 537438
Effective search space used: 537438
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
