ATCACTATTCGGAGAGGATCCGCGGAATTCTCCAATTTTCACTTCAGATT
TGGTAGGTTTTGAGAACTATGGGCATTGGTGTCTTCTCTTACTTAGACCC
CACTATAATGTTTTTTTTTCTGTCTAATGTAGCTTCTAAAGTGTAGCTAG
GCATCATTACTGAGCAAGAACACTTAAATCACACTCATAACCCAGACTTG
GTGCCAGGAACCCAGAAACACTGCCTCTATGCTAGATTGCCTGTGCTTCT
TAAGCAAGCGATCCTCTTTCTGGTCTTAGAAAATTGTGTCTTTTTAACAA
AAGAAATAATTACTTCAAATGTATTTGGTTCTTATTCTTTTTTTTAATGT
CAAAAATTGTGGTCAAAGATACTCTGAAACTTATAGAGGAGAATGTGGGA
AAAAGCCTCGAAGATATGGGCACAGGGGGAAAATTCCTGAACAGAACATA
AATGGCTTATGCTGTACGATCAAGAATCAACAAATGGGACCTCATAAAAT
TTCAAAGCTTCTGTAAGGCAAAAGACACTGTCAATAAAACAAAAAGGCCA
CCAACAGATTTGGAAAGGATTTTTACCAATCCTAAATCTGATAGGGGACT
AATGTCCAATATATACAAAGAACTCAAGAAGCTGGTCTCCAGAAAATCAA
AAAATGTGGCCCAGAGCTAAACAAAGAATTCTCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGATAAGGAGACTTGGTGAAGACAGTC
TCTTTCCAGAGGTCGGGGGGTCAGGTAACTGTAAGTCTTGGAGATGGCAT
CAAAGGTGGCCTTAGCAAAGTTGCCCAGGGTGGCAGTGCAGCCTCTGGCT
GAAGTGTAGCAGTCATCTATACCGGCCATCATCAAGATTTTCTTGGGCAC
AGGAGCAGAGACAATGCCAGTGCCTCTGGGGGCAGGGATGAGACACACCA
GCACAGAGCCACTGTCACTTTGTATGGAACAGTGTGGGGCTTGCCAATCT
TGTTCCCCCAGTAGTCTCTCCGCACAGGGTCGATGGAAAGCTTGGCCAAG
ATGATGGCCCCTAGGAAGGCAGTGGCAATCTCCTTGGAGCACTTAACACC
AAGACCAATGTGACCATTGTAGGTCCCCAATAGCGACGAAAGACTTGAAC
CTGGTCTGCTGGCCAGCCCGAGTCTGCTTCTGCACTGGCATGATTTTCAG
AACCTCATCCTTTAGGGACTTACCTAGGAAGAAGTCAATGATCTCAGACT
CCTTAATGGGCAGGGAGAACAGGTAGATCTCCTCCAAGGACTTGATCTTC
ATGTCCTTAACCAGGCAGCCCAGCTTGGTGACAGGGATCCACTCCTTGTC
TTCAGCTTTACCTCCACAAGCCCCGCGGCCTCGACCACGGCCACAGCCTC
AGCCACGAAGG

Query= MSMg01no482_f15.b1 MSMg01no482_f15.b1 CHROMAT_FILE:
MSMg01no482_f15.b1 PHD_FILE: MSMg01no482_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:14 2005
         (666 letters)



>mm_chr11_47186774_47187837
          Length = 1064

 Score = 1089 bits (563), Expect = 0.0
 Identities = 637/663 (96%), Gaps = 6/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctccaattttcacttcagatttggtaggttttgagaactatgggcattggtgtct 66
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctccaactttcacttcagatttggtaggttttgagaactatgggcattggtgtct 266

                                                                       
Query: 67  tctcttacttagaccccactataatgtttttttttctgtctaatgtagcttctaaagtgt 126
           ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 267 tctcttacttagaccccactataatgtttttt---ctgtctaatgtagcttctaaagtgt 323

                                                                       
Query: 127 agctaggcatcattactgagcaagaacacttaaatcacactcataacccagacttggtgc 186
           ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agccaggcatcattcctgagcaagaacacttaaatcacactcataacccagacttggtgc 383

                                                                       
Query: 187 caggaacccagaaacactgcctctatgctagattgcctgtgcttcttaagcaagcgatcc 246
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 384 caggaacccagaaacactgcctccatgctagattgcctgtgcttcttaagcaagccatcc 443

                                                                       
Query: 247 tctttctggtcttagaaaattgtgtctttttaacaaaagaaataattacttcaaatgtat 306
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tctctctggtcttagaaaattgtgtctttttaacaaaagaaataattacttcaaatgtat 503

                                                                       
Query: 307 ttggttcttattctttttttt-aatgtcaaaaattgtggtcaaagatactctgaaactta 365
           ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttggttcttcttctttttttttaatgtcaaaaattgtggtcaaagatactctgaaactta 563

                                                                       
Query: 366 tagaggagaatgtgggaaaaagcctcgaagatatgggcacagggggaaaattcctgaaca 425
           || ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||
Sbjct: 564 taaaggagaatgtgggaaaaagcctcaaagatatgggcacaggggaaaaattcctgaaca 623

                                                                       
Query: 426 gaacataaatggcttatgctgtacgatcaagaatcaacaaatgggacctcataaaatttc 485
           |||||| |||||||| |||| |||||||||||||| ||||||||||| |||||||||| |
Sbjct: 624 gaacatcaatggcttgtgctatacgatcaagaatcgacaaatgggacttcataaaattgc 683

                                                                       
Query: 486 aaagcttctgtaaggcaaaa-gacactgtcaataaaacaaaaaggccaccaacagatttg 544
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 684 aaagcttctgtaaggcaaaaagacactgtcaataaaacaaaaaggccaccaacagattgg 743

                                                                       
Query: 545 gaaaggattttt-accaatcctaaatctgataggggactaatgtccaatatatacaaaga 603
           |||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaaatgattttttacctatcctaaatctgataggggactaatgtccaatatatacaaaga 803

                                                                       
Query: 604 actcaagaagctggtctccagaaaatcaaaaaatgtggcccagagctaaacaaagaattc 663
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 804 actcaagaagctggtctccagaaaatcaaaaaatgtggcacagagctaaacaaagaattc 863

              
Query: 664 tca 666
           |||
Sbjct: 864 tca 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1064
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1054
Effective search space:   691424
Effective search space used:   691424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)