Query= MSMg01no482_h10.b1 MSMg01no482_h10.b1 CHROMAT_FILE:
MSMg01no482_h10.b1 PHD_FILE: MSMg01no482_h10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:22 2005
(665 letters)
>mm_chr11_57071787_57072853
Length = 1067
Score = 1261 bits (652), Expect = 0.0
Identities = 659/662 (99%), Gaps = 2/662 (0%)
Strand = Plus / Plus
Query: 6 gaattctctcttcctttatggctatcactttcctgtctattatcctgcccccccc--tcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 206 gaattctctcttcctttatggctatcactttcctgtctattatcctgcccccccccctcc 265
Query: 64 cgtactggtattgcctgctaagagttctcagtgctgaactggcacatatcctagcccctt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 cgtactggtattgcctgctaagagttctcagtgctgaactggcacatatcctagcccctt 325
Query: 124 ctgaccagagggaagtccagaggttgtttcaggaggattaggaggaggaccgccaagttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgaccagagggaagtccagaggttgtttcaggaggattaggaggaggaccgccaagttg 385
Query: 184 caatgttgcaattagatgagattggcgacattactcaccccactaccaggctggtctccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 caatgttgcaattagatgagattggcgacattactcaccccactaccaggctggtctccc 445
Query: 244 acctcggctcctgggcaggaactggctccttgtatctgcctgcccctctggcatgactca 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 446 acctcggctcctgggcaggaactggctccatgtatctgcctgcccctctggcatgactca 505
Query: 304 tccagtccctcctcccccatagtgaccctctggtgccaggtgaactgtcctccattccag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tccagtccctcctcccccatagtgaccctctggtgccaggtgaactgtcctccattccag 565
Query: 364 cctgctctcctggacccctgatttcatctcttcatgatcagcatacctgtggctttctct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cctgctctcctggacccctgatttcatctcttcatgatcagcatacctgtggctttctct 625
Query: 424 tcacccaagactgacagacacgtgctttgcaggcattgcagccaacaatgtgctggcacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tcacccaagactgacagacacgtgctttgcaggcattgcagccaacaatgtgctggcacc 685
Query: 484 tgtacagtgtcaccattcagcctgcttttgtttgggatgcctatggaatgggaagggtta 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgtacagtgtcaccattcagcctgcttttgtttgggatgcctatggaatgggaagggtta 745
Query: 544 acatgaccatttctgtcaatttcgatctgctacatctaaaacaatggccatgtgtcttgg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 acatgaccatttctgtcaatttcgatctgctacatctaaaacaatggccatgtgtcttgg 805
Query: 604 acttctgcaacagtcagataagactgggcatttacaggacttagcctgtgcctgctgtgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 acttctgcaacagtcagataagactgggcatttacaggacttagcctgtgcctgctgtgt 865
Query: 664 ca 665
||
Sbjct: 866 ca 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1067
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1057
Effective search space: 692335
Effective search space used: 692335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_h10.g1 MSMg01no482_h10.g1 CHROMAT_FILE:
MSMg01no482_h10.g1 PHD_FILE: MSMg01no482_h10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:23 2005
(595 letters)
>mm_chr11_57218096_57219090
Length = 995
Score = 857 bits (443), Expect = 0.0
Identities = 494/511 (96%)
Strand = Plus / Minus
Query: 10 ggttgaaacaaggcagaagcacagagatcaagtgcaatgttctgttctgttttaatgtct 69
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 511 ggttgaagcaaggcagaagcacagagaccaagtgcaatgttctgttctgttttaatgtct 452
Query: 70 ggttgttgtgaaatgcactgggaaggtgtttccccaggttctgatttacctgagatttta 129
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 451 ggttgttgtgagatgcactgggaaggtgtttccccaggttctgatatacctgagatttta 392
Query: 130 attcatttttagaaggtacgggtttgtccattcatcactgtgggacaccctgtcagactt 189
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 391 attcatttttagaaggtatgggtttgtccattcatcactgtgggacaccctgtcagaccc 332
Query: 190 tctggtgatgactccagtgtctgaacatttgagtttgtgatcaagtagggtagaatatat 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 331 tctggtgatgactccagtgtctgaacatttgagtttgtgatcaagtagggtagaagagat 272
Query: 250 tctccattgtttcttttgcatgggcatgtgtatatgtgtaaggacatgcaggtgtgtatc 309
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 271 tctccattgtttcttttgcatgggcatgtgtatatgtgtaagggcatgcaggtgtgtatc 212
Query: 310 catgtttgtgtgtacatgtggaggccagaagacaatcatgtatgcttttcccccaggatc 369
|||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 211 catgtttgtgtgtacacgtggaggccagaagacaatcgtgtatgcttttctcccaggatc 152
Query: 370 cattaacctcatttttaaagacaaggtctctcactggggcctgagacttgcctactaggc 429
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 151 cattaacctcatttttaaagacagggtctctcactggggcctgagacttgcctactaggc 92
Query: 430 aagtgtggctcaggggcccaaccatctctgtcccctaaccatgctaagaatacaaaccaa 489
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 91 aagtgtgactcaggggcccaaccatctctgtcccctaatcatgctaagaatacaaaccaa 32
Query: 490 ccccccggattctttacaggggtcttaggga 520
||||| |||||||||||||||||||||||||
Sbjct: 31 ccccctggattctttacaggggtcttaggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
