Query= MSMg01no483_b14.b1 MSMg01no483_b14.b1 CHROMAT_FILE:
MSMg01no483_b14.b1 PHD_FILE: MSMg01no483_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:10 2005
(606 letters)
>mm_chr11_28311656_28312661
Length = 1006
Score = 789 bits (408), Expect = 0.0
Identities = 441/452 (97%)
Strand = Plus / Minus
Query: 1 tgtggagtttgtttgttaaggtcaaggtttagaatttgagtgtgagttggtagaaagcta 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tgtggagtatgtttgttaaggtcaaggtttagaatttgagtgtgagttggtagaaagcta 393
Query: 61 ccagaggaattgggcttgaaacagagtaccattatttacatcttacaagagcaattttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ccagaggaattgggcttgaaacagagtaccattatttacatcttacaagagcaattttca 333
Query: 121 atatttgatagtgatcatattgtaaaagttcgaattggagagacacggcatagggaactc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 atatttgatagtgatcagattgtaaaagttcgaattggagagacacggcatagggaactc 273
Query: 181 ttgaatgggctgtttgtagtctgagagcttaatagtatcttcaatctagtggtgaagtca 240
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 272 ttgaatgggctgtttgtagtctgagagcttaatggtatcttcaatttagtggtgaagtca 213
Query: 241 taatttattttattatttcttttttaatatttattttgtatagcagatatatatgtgcac 300
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 212 taatttattttaatattccttttttaatatttattttgtgtagcagatatatatgtgcac 153
Query: 301 atgtccacatacctcattcctgtggaggtcaggaggggatgccacacactctgcaactgg 360
||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||
Sbjct: 152 atgtccacatacctcattcctgtggaggtcaggaggggatgtcaaatactctgcaactgg 93
Query: 361 agatccaggtggtagtaagctgtgtgaaataggtgctggagactaaatttgggtaggctg 420
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 92 agatccaggtggtagtaagctgtgtgaaataggtgctggagactacatttgggtaggctg 33
Query: 421 aactactgtgctatctcttcagtgccctcact 452
||||||||||||||||||||||||||||||||
Sbjct: 32 aactactgtgctatctcttcagtgccctcact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_b14.g1 MSMg01no483_b14.g1 CHROMAT_FILE:
MSMg01no483_b14.g1 PHD_FILE: MSMg01no483_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:10 2005
(553 letters)
>mm_chr11_28246465_28247415
Length = 951
Score = 988 bits (511), Expect = 0.0
Identities = 542/553 (98%), Gaps = 2/553 (0%)
Strand = Plus / Plus
Query: 1 tttataagacaaatcttgcagaatatcttatataaaatgattatttttagatgtttaaat 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttataagacaaattttgcagaatatcttatataaaatgattatttttagatgtttaaat 260
Query: 61 gattacaataaatataggtaaggagaagaacagagatagatgttacagtcctacctctga 120
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 gattacaataaatataggtgaggagaaaaacagagatagatgttacagtcctacctctga 320
Query: 121 aataatgacagaaaattgagggcaaatgtcatgtacctggaaatacattaaaaccataga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aataatgacagaaaattgagggcaaatgtcatgtacctggaaatacattaaaaccataga 380
Query: 181 ggaattattaggttttgacatggaaagttaatctttgtaggtctttggattgacatactg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaattattaggttttgacaaggaaagttaatctttgtaggtctttggattgacatactg 440
Query: 241 gaaatcataatgacagaagctaatgagttttcttccagaggaaataaaaactggaaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaatcataatgacagaagctaatgagttttcttccagaggaaataaaaactggaaatat 500
Query: 301 atgaggcaatgtcacattgggctaaatatatttaaaacaaatataattaattccagtgag 360
||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 --gaggcaatgtcacattgggttaaatatatttaaaacaaatacaattaattccagtgag 558
Query: 361 actttcaaaataattggtcatttcttattttattccactgtagtttattaatacaaattt 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 559 actttcaaaataattggtcatttcttcttttattccactgtagtttattaatacaaattt 618
Query: 421 taattaactctggtgacagtattatttgtctcttgcagcagctgcctacaaatctagggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 taattaactctggtgacagtattatttgtctcttgcagcagctgcctacaaatctagggc 678
Query: 481 aaagtctagcaataattgtgctgaatctcttcagggaaaaagtaagagctataatattta 540
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 679 aaattctagcaataattgtgctgaatctcttcagggaaaaagtaagagctacaatattta 738
Query: 541 ttaaactcaccca 553
|||||||||||||
Sbjct: 739 ttaaactcaccca 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 951
Length adjustment: 10
Effective length of query: 543
Effective length of database: 941
Effective search space: 510963
Effective search space used: 510963
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
