NAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGC
GGAATTCCCAAGCTTCCTCTACTGTTTGGCTGTGGGTGTCTGTATCTGTT
TGAGTTAGCTGCTGGGTAGAGCTTCTCCGGAAACAACATGTCCATTTGTT
TCTCAACACAGCCTGGAGTTTGCACAGTAGACTAGAATCCAGGAAATGCC
AGTGATCTTTCAGTTTTTACCTTCCCAGTATTGGACTAACAAACACATCC
AGCATATCTGGCCTTTTAGCATGAGTATGAGAAATATTAGGCCCTCATGT
GTGGCAAGTACACTCCTGGTCTTTCTATTTCACCAGTCCCTAGGAATTAG
ACCTTTATTTTTCTCGTCACAATTTCCACCATACATAAATGCTATTCTTA
TACTTCATCCTCTCAATCTCATCCTATAGAAATTTATATGTAATGATTAT
TAAGTACTTCATTATCATACTATGATAATGAAAATGTTGTTCATAGTTGA
ACCAGTTAATAAGTTGCATTTTTCTCCTCCTAGGGATACTTTCTATATTC
CTGAGTGCAATTTTTATTGTTTTTGTTTTGTATCTATGTTTTTTTGTTTT
TTAGGNGAACTTATTAGTAACAAGATTTCGTCAGTTTCTGAAATCTACAC
TGAGAACATTTTGCTTGTTTACATATTCTGGCTATCTTGTCTCTCAATGC
AGNTACTTTTCTCATGTGATCTGGGTGTTCCCCTGGTTGTACAGCGCTAT
TTTCCTGGGCCCTAGCTGCTGTTGACTCCAGAATCCTTN

NNNACGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTATTCAGATCTGTACTCA
ATTTTTAAGTTGGAATATTTGGTTTGTTGATACTGAGTTTCTTGAATATT
TTCCATATTCTGAATATTTGCCCTTTGTCAGATGTGGAATCCTTGAAAAT
ATTTTTTATTCTGTAGGCTGCTGTTTTGTTCTATTGATTGTATCCTTTAC
CTTTCAGGACACCTTTCCATATTCATGGGATCCCATTTATTTTCTATCTC
AGTAGCTGTGCTACTAGTGTTCTCTTCAGGAAATTATCTTGTGTACCAAT
GTATTCAAAGCTATTCCCCACTTTCTCTTCTGTTAGGTTCAGTGTATCTG
GATTTTATGTCTAGGTCCTTGATCCACTTAGACTTGTGTTTTGTGCATGG
TGATAGAGATTAGTCTATTTGCAGTCTTCTACAAATCAACATCCAGTGCC
ATTTTCTGCAGATGATTTCTTTTTTTCATTGTATACTCGTGACTCCTTAA
TCAAAAATCATAGGTCTATAGGTGTATGTATTTACTACTGGGTCTTAGGA
TCATTTCCAGTGATCAGCCTGTCTATTTTTTAACCATGTATTCCATATGT
ATATCATGTATTATTATAATGGTTCTGTAGTACAGGNTGAGATCAGGGAG
TTCTTTATTGCATAGGGTTGTTTTAGCTATGCCGTTTTTTGGTTGTTNGT
TTGGGTTTGTTTGCTTTGNTTTCTTAAATTTTCCAAGGAAA

Query= MSMg01no483_o21.b1 MSMg01no483_o21.b1 CHROMAT_FILE:
MSMg01no483_o21.b1 PHD_FILE: MSMg01no483_o21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:19 2005
         (510 letters)



>mm_chr11_27167502_27168411
          Length = 910

 Score =  955 bits (494), Expect = 0.0
 Identities = 506/510 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgtttggctgtgggtgtctgtatctgtttgagttagctgctgggtagagcttctccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtttggctgtgggtgtctgtatctgtttgagttagctgctgggtagagcttctccgg 260

                                                                       
Query: 61  aaacaacatgtccatttgtttctcaacacagcctggagtttgcacagtagactagaatcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaacatgtccatttgtttctcaacacagcctggagtttgcacagtagactagaatcc 320

                                                                       
Query: 121 aggaaatgccagtgatctttcagtttttaccttcccagtattggactaacaaacacatcc 180
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaaatgccagtgatctttcagtgtttaccttcccagtattggactaacaaacacatcc 380

                                                                       
Query: 181 agcatatctggccttttagcatgagtatgagaaatattaggccctcatgtgtggcaagta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatatctggccttttagcatgagtatgagaaatattaggccctcatgtgtggcaagta 440

                                                                       
Query: 241 cactcctggtctttctatttcaccagtccctaggaattagacctttatttttctcgtcac 300
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cactcctggtcagcctatttcaccagtccctaggaattagacctttatttttctcgtcac 500

                                                                       
Query: 301 aatttccaccatacataaatgctattcttatacttcatcctctcaatctcatcctataga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatttccaccatacataaatgctattcttatacttcatcctctcaatctcatcctataga 560

                                                                       
Query: 361 aatttatatgtaatgattattaagtacttcattatcatactatgataatgaaaatgttgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatttatatgtaatgattattaagtacttcattatcatactatgataatgaaaatgttgt 620

                                                                       
Query: 421 tcatagttgaaccagttaataagttgcatttttctcctcctagggatactttctatattc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatagttgaaccagttaataagttgcatttttctcctcctagggatactttctatattc 680

                                         
Query: 481 ctgagtgcaatttttattgtttttgttttg 510
           ||||||||||||||||||||||||||||||
Sbjct: 681 ctgagtgcaatttttattgtttttgttttg 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space:   450000
Effective search space used:   450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)