Query= MSMg01no485_b11.b1 MSMg01no485_b11.b1 CHROMAT_FILE:
MSMg01no485_b11.b1 PHD_FILE: MSMg01no485_b11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:54 2005
(617 letters)
>mm_chr11_66503211_66504230
Length = 1020
Score = 1125 bits (582), Expect = 0.0
Identities = 608/618 (98%), Gaps = 5/618 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaccagggt-attccagtctagttttgaatttatgatcttcttttttccatatc 62
|||||||||| |||| ||| ||||||||||||||||||||||||||||||| ||||||||
Sbjct: 683 ggaattcacctgggtaatt-cagtctagttttgaatttatgatcttcttttgtccatatc 625
Query: 63 ccaagagctagggacttaacgtatgttctactacatttatttatagctcagttttgcatc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaagagctagggacttaacgtatgttctactacatttatttatagctcagttttgcatc 565
Query: 123 atcatttctggtaataaaggagaaactatgggatgcatcattctgttgtgtggtccagat 182
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atcatttctggtcataaaggagaaactatgggatgcatcattctgttgtgtggtccagat 505
Query: 183 tgacagagatagtgatgatgaaatgtagtcatattttaagtatgtagtaaagtctgagat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgacagagatagtgatgatgaaatgtagtcatattttaagtatgtagtaaagtctgagat 445
Query: 243 gatagagttgaccttagctgacaaaaaacaccctgccatcat---aaaaaaacccaatga 299
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 444 gatagagttgaccttagctgacaaaaaacaccctgccatcataaaaaaaaaaaccaatga 385
Query: 300 tcacagaggcccaaagctatgtaggtggcaataatatatggaaatcctccatgaaataga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacagaggcccaaagctatgtaggtggcaataatatatggaaatcctccatgaaataga 325
Query: 360 aaacaatatcaagagcaaatagacaaatgcaaaagatgatgtagtgaacaaagaaaataa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaacaatatcaagagcaaatagacaaatgcaaaagatgatgtagtgaacaaagaaaataa 265
Query: 420 ggtattagcaagcctacaactaaggcctgagcaatgctaagaataattaattaattaatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtattagcaagcctacaactaaggcctgagcaatgctaagaataattaattaattaatg 205
Query: 480 tgaccagtcagtttggctgagtgctttatttcaaacatgtttagcaccacattgtcaggt 539
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 204 tgaccagtcagtttggctgagtgcttcatttcaaacatgtttagcaccacattgtcaggt 145
Query: 540 aaggaatgttttggccagatctatgggtgaactagtagtgtatggtggcataagggaagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aaggaatgttttggccagatctatgggtgaactagtagtgtatggtggcataagggaagt 85
Query: 600 gtatgggggctggagaga 617
||||||||||||||||||
Sbjct: 84 gtatgggggctggagaga 67
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1020
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1010
Effective search space: 613070
Effective search space used: 613070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_b11.g1 MSMg01no485_b11.g1 CHROMAT_FILE:
MSMg01no485_b11.g1 PHD_FILE: MSMg01no485_b11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:54 2005
(596 letters)
>mm_chr11_66437569_66438564
Length = 996
Score = 1067 bits (552), Expect = 0.0
Identities = 585/596 (98%)
Strand = Plus / Plus
Query: 1 ctgtttccaggccttgactgctctgagaggccactttctaggaactctgaacagcactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtttccaggccttgactgctctgagaggccactttctaggaactctgaacagcactca 260
Query: 61 gcgtcaagccgtttggcttcaatagagtagtttcatgtctgcagtattagaaagccaagg 120
||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 261 gcgtcaagccgtttggcttcaatagagcagtttcatgtctgcaatattagaaagccaagg 320
Query: 121 agcctatgtgctgcaaacctccatgcttttgacttggtcactgggtccacaactctttca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agcctttgtgctgcaaacctccatgcttttgacttggtcactgggtccacaactctttca 380
Query: 181 ccttaaagactgagaacatcgggaagaccgccattgtgaaaaggatgagtgtggattgcc 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccttaaagattgagaacatcgggaagaccgccattgtgaaaaggatgagtgtggattgcc 440
Query: 241 acagcttcctagaacctggtaacactgcctgagcagcacggcctcctccagtgtctaaat 300
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 acagcttcctagagcctggtaacactgcctgagcagcagggcctcctccagtgtctaaat 500
Query: 301 cacccccaaatattcacagttcagcagaaaactcccaggtactctgaattctacctgaat 360
||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 cacccccaaatattcacagctcagcagaaaactcccaggtactctgaattctgtctgaat 560
Query: 361 atgcatcctcttctttcaaatgggtgttcaaaacattcaactctcattccttgcatcgtt 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 atgcatcctcttctttcaaatgggtgttcaaaacattcaactcccattccttgcatcgtt 620
Query: 421 ggcaccaatctatctcaacaaggccatgtttttagtggagaaataagaaccagaccaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcaccaatctatctcaacaaggccatgtttttagtggagaaataagaaccagaccaaga 680
Query: 481 ctctttctaagagttgatacccaccgagggagtgccctgtagttctcttcacatccttgc 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 ctctttctaagagttgatacccaccaagggagtgccctgtagttctcttcacatccttgc 740
Query: 541 tcccaaacttcatcctgttacagcattatactcactctgaatttttacattctctc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcccaaacttcatcctgttacagcattatactcactctgaatttttacattctctc 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
