Query= MSMg01no485_g10.b1 MSMg01no485_g10.b1 CHROMAT_FILE:
MSMg01no485_g10.b1 PHD_FILE: MSMg01no485_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:20 2005
(244 letters)
>mm_chr11_44404462_44405105
Length = 644
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%), Gaps = 2/245 (0%)
Strand = Plus / Plus
Query: 1 ttctacatccacagtgctccccatacattaaaaaaaaaaa-caaaatagaataaattacc 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttctacatccacagtgctccccatacattaaaaaaaaaaaacaaaatagaataaattacc 260
Query: 60 ttttactgtgaggtgtttatgttttgtgtatccatatactaagctacaaatgagaataga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttactgtgaggtgtttatgttttgtgtatccatatactaagctacaaatgagaataga 320
Query: 120 aacctctgacttcttatttcttttgataactgtctggaattgtgcacttttcactagagt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctctgacttcttatttcttttgataactgtctggaattgtgcacttttcactagagt 380
Query: 180 cagccggtaaatatgaattaaacaaacaaatgagtgctatgctccactgagcactctatt 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagc-ggtaaatatgaattaaacaaacaaatgagtgctatgctccactgagcactctatt 439
Query: 240 gcaat 244
|||||
Sbjct: 440 gcaat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_g10.g1 MSMg01no485_g10.g1 CHROMAT_FILE:
MSMg01no485_g10.g1 PHD_FILE: MSMg01no485_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:20 2005
(620 letters)
>mm_chr11_44572064_44573083
Length = 1020
Score = 1007 bits (521), Expect = 0.0
Identities = 545/557 (97%), Gaps = 9/557 (1%)
Strand = Plus / Minus
Query: 65 actcaccaccaagactgataacctcagttagaactctgggacccacatggttcgggacgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 actcaccaccaagactgataacctcagttagaactctgggacccacatggttcgggac-- 963
Query: 125 gggttgggggcctgaactctttccagttgtcttctggactctgttctgggacactaaggc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 -----gggggcctgaactctttccagttgtcttctggactctgttctgggacactaaggc 908
Query: 185 acacatatgcacaaagcaaatacagaaaaataagaacaaatttttaaagaaatgattaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 acacatatgcacaaagcaaatacagaaaaataagaacaaatttttaaagaaatgattaat 848
Query: 245 atttatgtaattaattaaaaataattacattaacattttagatttctaaactgaacacaa 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 aaacatgtaattaattaaaaataattacattaacattttagatttctaaactgaacacaa 788
Query: 305 accag-aaaaaaatattttaaagacttgggggggtgggagtagtttcatgatggtttcaa 363
||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 787 accagaaaaaaaatattttaaagactt-ggggggtgggagtagtttcatgatggtttcaa 729
Query: 364 agtgtgtcctctaagttctttaagttgcatgccaacttcagagagactcaactgcccact 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 agtgtgtcctctaagttctttaagttgcatgccaacttcagagagactcaactgcccact 669
Query: 424 gaagggagctggacgagaatttgctgatgagcaaaagaactgactccaacatgaaacctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaagggagctggacgagaatttgctgatgagcaaaagaactgactccaacatgaaacctc 609
Query: 484 aaggctgggtcagaaggcacttcagtttctttccagtttgctcctggggagccaggtgcc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaggctgggtcagaaggcacttcagtttctttccagtttgctcctggggagccaggtgcc 549
Query: 544 ttgttctggtgacacctgacagctgggagagccctcatagggttacaggcatgtgcccac 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ttgttctggtgacacctgacagctgggagagccctcatagggttacaggcatgtgcccac 489
Query: 604 agccctgatgcataagc 620
|||||||||||||||||
Sbjct: 488 agccctgatgcataagc 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
