Query= MSMg01no485_i21.b1 MSMg01no485_i21.b1 CHROMAT_FILE:
MSMg01no485_i21.b1 PHD_FILE: MSMg01no485_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:32 2005
(646 letters)
>mm_chr11_57071088_57072132
Length = 1045
Score = 1172 bits (606), Expect = 0.0
Identities = 639/656 (97%), Gaps = 12/656 (1%)
Strand = Plus / Minus
Query: 1 aagtaactgagctatgcacttcagcatctatgtgttcctatgtgagagaagtcccaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 aagtaactgagctatgcacttcagcatctatgtgttcctatgtgagagaagtcccaggat 822
Query: 61 tttggtatgaacagctggagttttatatccgaggaaacaaaggctatgcagttaagtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tttggtatgaacagctggagttttatatccgaggaaacaaaggctatgcagttaagtcac 762
Query: 121 tccagttgcagagcttactaaatggtagatctgtgatcaaacacaagtgtgtctggatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tccagttgcagagcttactaaatggtagatctgtgatcaaacacaagtgtgtctggatgg 702
Query: 181 gaacttctcaacctgagcaaggccatctttacatctttgccgacctgacccgtccagctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gaacttctcaacctgagcaaggccatctttacatctttgccgacctgacccgtccagctc 642
Query: 241 cgtctttctcttcacttgcttgtctaagcctctctgtaaccctgggacaagcacctgtct 300
|||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cgtc-tgcccttcacttgcttgtctaagcctctctgtaaccctgggacaagcacctgtct 583
Query: 301 ttccatttggtctccccaagcagattcttagttctgccctctgggattactcagctgtcc 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ttcgatttggtctccccaagcagattcttagttctgccctctgggattactcagctgtcc 523
Query: 361 actccaccttattgtctgctatttctttgggtgcctcggctcttctgctttgcaaactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 actccaccttattgtctgctatttctttgggtgcctcggctcttctgctttgcaaactca 463
Query: 421 gaggttggcatgcatgcttcctgcttcttcagacctaccacaatgcttatagcgtttgct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaggttggcatgcatgcttcctgcttcttcagacctaccacaatgcttatagcgtttgct 403
Query: 481 gtcagtgcaggcttataaaatgccatatcccctactccttatagcaccatgcacaaaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtcagtgcaggcttataaaatgccatatcccctactccttatagcaccatgcacaaaagc 343
Query: 541 c----------aaaaaaaaaagtcactactgaagcgcgtgacaatggtggacaaagaaaa 590
| ||||||||||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 342 caaaaaaaaaaaaaaaaaaaagtcac-actgaagcgtgtaacaatggtggacaaagaaaa 284
Query: 591 tgtggtacagatgcagaatggaataccatttctgtcgtttttccaaagcctgggtg 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tgtggtacagatgcagaatggaataccatttctgtcgtttttccaaagcctgggtg 228
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1045
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1035
Effective search space: 658260
Effective search space used: 658260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_i21.g1 MSMg01no485_i21.g1 CHROMAT_FILE:
MSMg01no485_i21.g1 PHD_FILE: MSMg01no485_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:32 2005
(540 letters)
>mm_chr11_56904428_56905367
Length = 940
Score = 988 bits (511), Expect = 0.0
Identities = 526/531 (99%)
Strand = Plus / Plus
Query: 1 caggtatccaccaccatatcaagctaccactcatctctctttttaattcttcctcttaat 60
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggtacccaccaccatatcaggctaccactcatctctctttttaattcttcctcttaat 260
Query: 61 cttctctccctgttgtctctctcccctgagttatattctgcaggccttaactttgtgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttctctccctgttgtctctctcccctgagttatattctgcaggccttaactttgtgcaa 320
Query: 121 aatactgcaactcccaagcagggctgtccccagaggacttgaattaattgttctggatca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 aatactgcaactcccaagcagggctgtccccagaggacttgaattaattgttctgggtca 380
Query: 181 gtgtcctccaggctcccaaggcagctctggccccgtagacaatgcataacccatcctccc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtcctccaggctctcaaggcagctctggccccgtagacaatgcataacccatcctccc 440
Query: 241 ccttaggtgatataatggaagagcatttgttttggatcgcatgaactcttgagtcatgac 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ccttaggtgatataatggaagagcatttgttttggatcgcatgagctcttgagtcatgac 500
Query: 301 tgactcacaaagcagtgagcaggagggcatgagggcatatgctcattctcttgctatgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgactcacaaagcagtgagcaggagggcatgagggcatatgctcattctcttgctatgtc 560
Query: 361 tcctccttgccagaccagccctatggatggatgtgggttcagtccacacaatagggtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctccttgccagaccagccctatggatggatgtgggttcagtccacacaatagggtcct 620
Query: 421 aacaatcagtgagctttacccaacactggggaaccacattgctgtgtgtatcatgcagct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaatcagtgagctttacccaacactggggaaccacattgctgtgtgtatcatgcagct 680
Query: 481 cattcccccaaaaccttcatgcaagagagattaccaagaatgccatttaca 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cattcccccaaaaccttcatgcaagagagattaccaagaatgccatttaca 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
