CCTCCCTTATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTATAAGGAATTCCAAAGTAATCATAAACTTACACA
ATTAAGAGAGAGTCAGGGGCTAGAGAGATGGTACAGTGGTTAAGAGCACT
GACTGCTTTTCCAGAGGTCCTGAGTTCAATTACAGGTGTCCCACAACCAC
CTGTAATAGGATCTGATGCCGTCTTCTAGTGTCTGAAGACAGCTACAGTG
TACTCATATACATAATAAATAAATATTTTTTAAAAAGAAAGTAGGGCTTG
GAGTCAGGCCACACCCATTTCCAGAGCACTGCTGCACTCTGTGGGTGTGC
ATTATAAGTTCATGGATGGCAGAGTGGGCAGGACAGGACCAGCAGGATGC
CTGGGCACATACCTGTCAACAGGTAAAGAGTGCAAAGATGGAGTACATAA
ACAGACTGGGGGAGGAGGGCAACTGGGCAGAAGCACAGCCAGAAGGTATA
CATTTCCCAAGGTCGGCTTTTCCTCAATTGTGCTACTTATCTCCTAAGAA
CACCTGAGTGACTGCAGAGCAAACTTTTGTGCTAAGGCCTGAAATCTGAA
TCAAGCATGTGCACAAACAGCCTCCTTATTGCTGCAGACTTCTTAGTCTA
CAACTAAAGACTCTAGCTGGTCTCTAGCTGGTCTCTAGCTGGTCTCTAGC
TGGTCTGGGGATACCTTCCCAAGTGAAGACACAGAAGAGC

GTTTCACACTCACTCTTCAAGAATAACGCCATNGAGTAGGATGGATTACG
CTCTTCTCCAACAAGACAAGAAGAGAAGAGCTCTATATATTATTATCTAC
ACTCCGCAAGCGCTTACATCTCCATGATCAGGCGAAGATGTATGGCGTAT
GAGAACGCCATGCCCCTACACCACTACTACCGGAGTGATCATACNCCACG
GAGCGNCNATAGATCTACGTCTGCTCCTATGGTATTATATAGGTCGAGAG
TGGTGTGTCCAGACAAGATCGNCGGGCGCGTATGTCCCTCCGTACACTAG
CTTATACNTCTCTCTCCCTCACTAGCAACGATTATAGTCCCTCGTGTATT
TAGCTCAACCCCNCCGCGTGNTTCACNCTCTCTCTCTATCCCACCTCCTC
GCATCATCCGGGGCTGTTACGTTGGTTATGGCCGTGGTAGCACGCGACAG
AAGGTGATGAAAGTGAGGGCTGATGAATATATTGCGTTGCGCAATTGCCT
CGTCCATAATGGTGTGAGCGGTCCGGGTAGCGCAACCACCCAGTCTGTCT
GTATGCATCTATTAGTCATACTCTCGTGGTAGTGACGAGACATCGATATA
ATTATAGACTAACAATATAATGTGCGGCGGACTCCTCACATCGACTTATC
CGCGTCGATTATATTAATTACCTCGTGTTATATTGTCCGCAGCGACGTGA
AATCGCTGATAGCAGGCCACGTATACCGCGTACGTGATTATAAGATAAAT
GTCACGCAACCACGATATCTAACCGCTCGCTACGAGGATGTACTTAGAAA
TCACCAGNGCACTCTCTCGCTCCTCTCTGCATCATCGTGTTTGTGGTATC
GGGCCTACACTACCGCGCGTTGAAAGACCCTCATGCAGGCGGATGCGACC
CACCTAGATCGTGTATGTATATATCACCACGCGCCACGAGCGTGCTGCGC
GACTGGCAGGTGTGCTATATGTTAGTATATAATATATCTGTGNTGTGCGC
GCGCATACATCGTGGACGCAGCTGTATATTATATCTATATATCTACATGG
TCGTCTAGATACGTCGTATTTGTCGCGCGACACGCGCGCCTACTCTATTT
GTGACTGTATATTAGCCGCAACATGTCTCAACCGCGTGTGCGTATGTGGC
TCTCATGCTCCGCGAGAGTGAGCACGCGATTGTGAATTGTGCGTGAGGAG
CTGTTGCTAGCGCACTAGTGGGCCTGTGAGCCGCGAATGTGGAGTGGCGT
ACCACAGAGGGCAAGCAGATGGTGACAATGACGAGTGATATATGTATGCT
ATGATGTACGCGACATCNAGCTTATACGGTGCTCATANCATCGACATGAN
ACAGCGAGNGGCATGTCGAATCGAGTGACTAATCATGCAAN

Query= MSMg01no487_b04.b1 MSMg01no487_b04.b1 CHROMAT_FILE:
MSMg01no487_b04.b1 PHD_FILE: MSMg01no487_b04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:34 2005
         (655 letters)



>mm_chr11_20678817_20679871
          Length = 1055

 Score = 1054 bits (545), Expect = 0.0
 Identities = 620/665 (93%), Gaps = 35/665 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    aagtaatcataaacttacacaattaagagagagtcaggggctagagagatggtacagtgg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 aagtaatcataaacttacacaattaagagagagtcaggggctagagagatggtacagtgg 964

                                                                        
Query: 61   ttaagagcactgactgcttttccagaggtcctgagttcaattacaggtgtcccacaacca 120
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 963  ttaagagcactgactgcttttccagaggttctgagttcaattacaggtgtcccacaacca 904

                                                                        
Query: 121  cctgtaataggatctgatgccgtcttctagtgtctgaagacagctacagtgtactcatat 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 903  cctgtaataggatctgatgccgtcttctagtgtctgaagacagctacagtgt--tcatat 846

                                                                        
Query: 181  acataataaataaatattttttaa---------aaagaaagtagggcttggagtcaggcc 231
            ||||||||||||||||||||| ||         |||||||||||||||||||||||||||
Sbjct: 845  acataataaataaatatttttaaaaagaaaggtaaagaaagtagggcttggagtcaggcc 786

                                                                        
Query: 232  acacccatttccagagcactgctgcactctgtgggtgtgcattataagttcatggatggc 291
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785  acacccatttgcagagcactgctgcactctgtgggtgtgcattataagttcatggatggc 726

                                                                        
Query: 292  agagtgggcaggacaggaccagcaggatgcctgggcacatacctgtcaacaggtaaagag 351
            | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 725  aaagtgggcaggacaggaccagcaagatgcctgggcacatacctgtcaacaggtaaagag 666

                                                                        
Query: 352  tgcaaagatggagtacataaacagactgggggaggagggcaactgggcagaagcacagcc 411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 665  tgcaaagatggagtacataaacagactgggggaggagggcaactgggcagaagcacagct 606

                                                                        
Query: 412  aga-aggtatacatttcccaaggtcggcttttcctcaattgtgctacttatctcctaaga 470
            ||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 605  agaca-gtatacatttcccaaggttggcttttcctcagttgtgctacttatctcctaaga 547

                                                                        
Query: 471  acacctgagtgactgcagagcaaacttttgtgctaaggcctgaaatctgaatcaagcatg 530
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546  acacctgagtgactgcagagcaaacttttgtgctaaggcctgaaatctgaatcaagcatg 487

                                                                        
Query: 531  tgcacaaacagcctccttattgctgcagacttcttagtctacaactaaagactctagctg 590
            |||| ||||||||| ||||||||||||||||||||||||||||||||||||         
Sbjct: 486  tgcataaacagccttcttattgctgcagacttcttagtctacaactaaaga--------- 436

                                                                        
Query: 591  gtctctagctggtctctagctggtctctagctggtctggggataccttcccaagtgaaga 650
                         |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435  -------------ctctagctggtctctagctggtctggggataccttcccaagtgaaga 389

                 
Query: 651  cacag 655
            |||||
Sbjct: 388  cacag 384


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space:   674025
Effective search space used:   674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)