Query= MSMg01no487_k01.b1 MSMg01no487_k01.b1 CHROMAT_FILE:
MSMg01no487_k01.b1 PHD_FILE: MSMg01no487_k01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:17 2005
(682 letters)
>mm_chr11_92987350_92988431
Length = 1082
Score = 1058 bits (547), Expect = 0.0
Identities = 565/571 (98%), Gaps = 2/571 (0%)
Strand = Plus / Minus
Query: 5 gaattcttggctcta-ttctatcagaacaccttgtggaaatcacgctaacaaggacaacc 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaattcttggctctagtt-tatcagaacaccttgtggaaatcacgctaacaaggacaacc 512
Query: 64 actgctttattgatagatgtagcctatcaagaatactcaaccactatctccatgttcttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actgctttattgatagatgtagcctatcaagaatactcaaccactatctccatgttcttt 452
Query: 124 tatttccagtccatgctactcatcccaaaagccaatatggctttccaagttgtccttaac 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 451 tatttccagtccatgctactcatcccaaaagccaatatggctttccaaattgtccttaac 392
Query: 184 aattattgtgaagtttatcaattttttcacattacccaaaataacttttaattttacgag 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 391 aattattgtgaagtttatcaattttttcacattacccaaaataacttttaattttatgag 332
Query: 244 gctaaatttttatgtgatttttctctttccattattaaggtgaaggcactgccatattcc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gctaaatttttatgtgatttttctctttccattattaaggtgaaggcactgccatattcc 272
Query: 304 ctttcatcaccatcatcatcccaaatattagttactgtatgtaaaatagatcatgtgaat 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 271 ctttcatcaccatcatcatcccaaatattagttactgtatgcaaaatagatcatgtgaat 212
Query: 364 caattgctttacttttcacaaggatattatgatacagttgatattgttatctccagtttg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 taattgctttacttttcacaaggatattatgatacagttgatattgttatctccagtttg 152
Query: 424 caggtgaagaaacagacattgggaagacaagtggtttgcacaggacacaatggattctgt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 caggtgaagaaacagacattgggaagacaagtggtttgcacaggacacaatggattctgt 92
Query: 484 gtagtaaagcaggtattcaaatgttctagaatctataagcttgaccactgagccctcctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gtagtaaagcaggtattcaaatgttctagaatctataagcttgaccactgagccctcctc 32
Query: 544 cttttacatgtgttacctttatgatgcaagc 574
|||||||||||||||||||||||||||||||
Sbjct: 31 cttttacatgtgttacctttatgatgcaagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_k01.g1 MSMg01no487_k01.g1 CHROMAT_FILE:
MSMg01no487_k01.g1 PHD_FILE: MSMg01no487_k01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:17 2005
(164 letters)
>mm_chr11_92854928_92855491
Length = 564
Score = 300 bits (155), Expect = 3e-86
Identities = 161/163 (98%)
Strand = Plus / Plus
Query: 1 ttcccttaagtagcttcttgtcagttgtttgttcataaatattttgacataattaatgta 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttcccttaagtagcttcttgtcagttgtttgttcataaatattttaacataattaatgta 260
Query: 61 gctaatgtttatgttaaaatatttatagaatttcatgttttaacatgcatgcttatgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctaatgtttatgttaaaatatttatagaatttcatgttttaacatgcatgcttatgaac 320
Query: 121 aagtcagtcatttctgaacatcagtgcaattccactttatgac 163
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtcggtcatttctgaacatcagtgcaattccactttatgac 363
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
