Query= MSMg01no493_d14.b1 MSMg01no493_d14.b1 CHROMAT_FILE:
MSMg01no493_d14.b1 PHD_FILE: MSMg01no493_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:40 2005
(696 letters)
>mm_chr11_120450159_120451254
Length = 1096
Score = 658 bits (340), Expect = 0.0
Identities = 358/369 (97%), Gaps = 9/369 (2%)
Strand = Plus / Minus
Query: 328 agagaaagcctgtctcaaaaaaccaaaaaaccaaaaaaacaaaaaaaaaaaaacaaaaga 387
||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 1096 agagaaagcctgtctca-------aaaaaac--aaaaaacaaaaaaaaaaaaacaaaaga 1046
Query: 388 aactgtttgctgtgtttgggtacacaggtgccactgtctgtatgtggaggtcagaggaga 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 aactgtttgctgtgtttgggtacacaggtgccactgtctgtatgtggaggtcagaggaga 986
Query: 448 acttgatggagtcacttctacctttatgttgatcccaggattcaaactcaggtcatgaag 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 acttgatggagtcacttctacctttatgttgatcccaggattcaaactcaggtcatgaag 926
Query: 508 attgtatgacaggtgcttttgtttcactgtgagtaatgggaagcattaactgattcagtg 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 attgtatgacaggtgcttttgtttcactgtgagtaatgggaagcattaactgattcagtg 866
Query: 568 tccgtgcttatataaagtaagggctgcaagggctgctccctcgtagaccgccatgtgctt 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tccgtgcttatataaagtaagggctgcaagggctgctccctcgtagaccgccatgtgctt 806
Query: 628 ttcctttctgattttgggttttccagacagggtcacatgtgcactactctgtctggnctt 687
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 805 ttcctttctgattctgggttttccagacagggtcacatgtgcactactctgtctggcctt 746
Query: 688 gaactccag 696
|||||||||
Sbjct: 745 gaactccag 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_d14.g1 MSMg01no493_d14.g1 CHROMAT_FILE:
MSMg01no493_d14.g1 PHD_FILE: MSMg01no493_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:40 2005
(657 letters)
>mm_chr11_120331688_120332744
Length = 1057
Score = 1201 bits (621), Expect = 0.0
Identities = 648/657 (98%)
Strand = Plus / Plus
Query: 1 atacccttcagcagaggaggaaagactctctggatccatgtgagattatccccaggacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacccttcagcagaggaggaaagactctctggatccatgtgagattatccccaggacca 260
Query: 61 cctaaggattgtgatgtggatggtgatacagctggattgggcaaatcgatgctgttcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctaaggattgtgatgtggatggtgatacagctggattgggcaaatcgatgctgttcccc 320
Query: 121 atttcatgggacccagcatcagggtttggtctctcaggaagccccaactcatgctgccca 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttcatgggatccagcatcagggtttggtctctcaggaagccccaactcatgctgccca 380
Query: 181 gaacctgtctcaggcgctgagctgtgagctgaatcagaccaggtcctgtttgttctagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaacctgtctcaggcgctgagctgtgagctgaatcagaccaggtcctgtttgttctagca 440
Query: 241 ggtcctatctgttaaagagctaagtgttaggagccctcgctgtttttgttttggcacact 300
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtcctagctgtaaaagagctaagtgttaggagccctcgctgtttttgttttggcacact 500
Query: 301 gtgtcccactgtgctgcaaggggcagtaggctggcttgctcctctcctggatggaaccct 360
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 501 gtgtcccactgtgctgcaaggggcagcaggctggcttgctcctctcctggaaggaaccct 560
Query: 361 tagagggaaacgcaaatcccagtgtaaaagcccttgtatcccttcctgaagctgcttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagagggaaacgcaaatcccagtgtaaaagcccttgtatcccttcctgaagctgcttcat 620
Query: 421 cccaacataatatgtcacagcctccctgagagtgccaagcatgaagctggactgtagctc 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cccaacataatgtgtcacagcctccctgagagtgccaagcatgaagctggactgtagctc 680
Query: 481 acagggcctgagcccctggagaaacatctgaagaggatatcaccctgcctctctcagatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagggcctgagcccctggagaaacatctgaagaggatatcaccctgcctctctcagatc 740
Query: 541 atggtcctgtcttcctcgtgccttttggagagtttagctgtggaccctagagaactgtgt 600
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atggtcctgtcttcctcatgctttttggagagtttagctgtggaccctagagaactgtgt 800
Query: 601 tactgcccaggatcccctggagagatggaaggaggcatggttgtagattgggaacat 657
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 801 tactgcccaggatcccctggagagatagaaggaggcatggttgtagattgggaacat 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
