Query= MSMg01no493_j10.b1 MSMg01no493_j10.b1 CHROMAT_FILE:
MSMg01no493_j10.b1 PHD_FILE: MSMg01no493_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:11 2005
(534 letters)
>mm_chr11_96231044_96231979
Length = 936
Score = 1000 bits (517), Expect = 0.0
Identities = 527/531 (99%), Gaps = 2/531 (0%)
Strand = Plus / Minus
Query: 4 gaattctccctcccttgcgtacccaagattatacagagaggggttcatttggaaaactgg 63
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaattctccctcccatgagtacccaagattatacagagaggggttcatttggaaaactgg 652
Query: 64 gtattttcttttttttcattctggtaagggaagttgtgggagtacatagatggttttcca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtattttcttttttttcattctggtaagggaagttgtgggagtacatagatggttttcca 592
Query: 124 tgcgtacacacagggtggggagtgggagaggtgcctgagaggtgtggaggagtctatgac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgcgtacacacagggtggggagtgggagaggtgcctgagaggtgtggaggagtctatgac 532
Query: 184 cgaagcattcgggtatcaattttggagagttggacaatacagactgctgatttgagtcaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cgaagcattcgggtatcaattttggagagttggacaatacagactgctgatttgagtcaa 472
Query: 244 atggaacaagatgca--ttttttttttttttggcttgcctgtttaccagactctcttttg 301
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atggaacaagatgcattttttttttttttttggcttgcctgtttaccagactctcttttg 412
Query: 302 gcatttgtgagagaggactagagcatgatgttttgttttctccaaataaacaccttcctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gcatttgtgagagaggactagagcatgatgttttgttttctccaaataaacaccttcctc 352
Query: 362 taaacccaatccagggccttgggttggaagtgggattcaagtaggagaatgcaatggagt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 taaacccaatccagggccttgggttggaagtgggattcaagtaggagaatgcaatggagt 292
Query: 422 ctggatctttgtatctaaggagatggaaggctcttgacccactggggattattttgagtc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctggatctttgtatctaaggagatggaaggctcttgacccactggggattattttgagtc 232
Query: 482 tgtctcttgttaatgaagaattgatcttacacacacacacacacacacaca 532
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tgtctcttgttaatgaagaattgatcttacacacacacacacacacacaca 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 936
Length adjustment: 10
Effective length of query: 524
Effective length of database: 926
Effective search space: 485224
Effective search space used: 485224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_j10.g1 MSMg01no493_j10.g1 CHROMAT_FILE:
MSMg01no493_j10.g1 PHD_FILE: MSMg01no493_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:11 2005
(353 letters)
>mm_chr11_96048515_96049267
Length = 753
Score = 663 bits (343), Expect = 0.0
Identities = 352/357 (98%), Gaps = 4/357 (1%)
Strand = Plus / Plus
Query: 1 atacaggcaggctacagacagtcagcctggctcctctagtctcctgtgtcagaaccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacaggcaggctacagacagtcagcctggctcctctagtctcctgtgtcagaaccttgg 260
Query: 61 agacctgacaggacggaatggacttttgcccaggtcatggttcacagggcagtaaccagg 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacctgacgggacggaatggacttttgcccaggtcatggttcacagggcagtaaccagg 320
Query: 121 aagtgcccgatagtaatatcaagctgggattgaggttcagaaatggtgatggggtggggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagtgcccgatagtaatatcaagctgggattgaggttcagaaatggtgatggggtggggt 380
Query: 181 ggctttcaatcttggaagcaaggagctatttttaagtctttagagtacctaggactttag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctttcaatcttggaagcaaggagctatttttaagtctttagagtacctaggactttag 440
Query: 241 cctctttgattttcaaggactggagcccgtgagggacaaagaggatagtactcaataggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctctttgattttcaaggactggagcccgtgagggacaaagaggatagtactcaataggg 500
Query: 301 atggattgtgtgtgtgtgtgtgtgtgt----atgcgtgtgtgtgtgtgtgtgtgtgt 353
||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 atggattgtgtgtgtgtgtgtgtgtgtgtgtatgcgtgtgtgtgtgtgtgtgtgtgt 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
