Query= MSMg01no495_f15.b1 MSMg01no495_f15.b1 CHROMAT_FILE:
MSMg01no495_f15.b1 PHD_FILE: MSMg01no495_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:25 2005
(459 letters)
>mm_chr11_72511793_72512651
Length = 859
Score = 880 bits (455), Expect = 0.0
Identities = 458/459 (99%)
Strand = Plus / Plus
Query: 1 gttacactcggtagtaactttcatctgtgactagagtgaaataattttttaaagcaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttacactcggtagtaactttcatctgtgactagagtgaaataattttttaaagcaagct 260
Query: 61 tgatagtttctagaatttgtcaaagcatccaaggcttgaatctgcagtggatcctcttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatagtttctagaatttgtcaaagcatccaaggcttgaatctgcagtggatcctcttgc 320
Query: 121 cttggtttcctgaatgttggtatgatgaacatgagccacagcgcctggtttactagatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttggtttcctgaatgttggtatgatgaacatgagccacagcgcctggtttactagatta 380
Query: 181 ttttttaagagtataaacctagagtagtaaatatctatgaatacctctcttaattagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttaagagtataaacctagagtagtaaatatctatgaatacctctcttaattagggt 440
Query: 241 tattattgctgttataaaacatgaccaaaaacaatttgggaaggaaagggcttatttcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattattgctgttataaaacatgaccaaaaacaatttgggaaggaaagggcttatttcag 500
Query: 301 tcaccttccatataacaatttgtcattaaaaagcagtgagggtaataacttaagcaggtc 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaccttccatataacaatttgacattaaaaagcagtgagggtaataacttaagcaggtc 560
Query: 361 aggagactacaggcaggagctgatggagaggccgtggaggagtgctggttactaccttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aggagactacaggcaggagctgatggagaggccgtggaggagtgctggttactaccttgc 620
Query: 421 tcctattggctttgctcagcctgcttttcttatagcact 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctattggctttgctcagcctgcttttcttatagcact 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_f15.g1 MSMg01no495_f15.g1 CHROMAT_FILE:
MSMg01no495_f15.g1 PHD_FILE: MSMg01no495_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:25 2005
(599 letters)
>mm_chr11_72656179_72657178
Length = 1000
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 293 aattaccataattctgatctgtgtaacttggaaggcagagtcacttcctgtagaaaaaat 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aattaccataattctgatctgtgtaacttggaaggcagagtcacttcctgtagaaaaaat 618
Query: 353 agtacttgctctcgtttttccagtctctgtaagaaaacctaagaaaaaggaaaaggaaga 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 617 agtacttgctctcgtttttccagtctctgtaagaaaacctaagaaaaaggaaaagaaaga 558
Query: 413 gaaagttaggacgtttgagtcatggttacagcccc-aagatctagtatcaacaaaagcaa 471
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 557 gaaagttaggacgtttgagtcatggttacagccccgaagatctagtatcaacaaaagcaa 498
Query: 472 gggtagccagcctatctggtacctttgtgacaattagaaaaacaatacctctttagcaga 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gggtagccagcctatctggtacctttgtgacaattagaaaaacaatacctctttagcaga 438
Query: 532 tgtggctccctcccacatctctaccttctgcaaaaaagcagtaagagattctccaacaca 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tgtggctccctcccacatctctaccttctgcaaaaaagcagtaagagattctccaacaca 378
Query: 592 cacacaca 599
||||||||
Sbjct: 377 cacacaca 370
Score = 83.9 bits (43), Expect = 3e-20
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 265 ctacaactacttaagaaggtggaagagaaattaccataattct 307
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 ctacaactacttaagaaggtggaagagaaattaccataattct 958
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
