Query= MSMg01no495_h13.b1 MSMg01no495_h13.b1 CHROMAT_FILE:
MSMg01no495_h13.b1 PHD_FILE: MSMg01no495_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:33 2005
(574 letters)
>mm_chr11_38485631_38486604
Length = 974
Score = 1069 bits (553), Expect = 0.0
Identities = 568/573 (99%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 3 ggcaatgatacacaatccatatcccattaactttacagagtattgtgtatatttttatac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggcaatgatacacaatccatatcccattaactttacagagtattgtgtatatttttatac 262
Query: 63 caacaagttgggttcaccattattggaataaaaataaaaattgtcttcttgaagcctact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caacaagttgggttcaccattattggaataaaaataaaaattgtcttcttgaagcctact 322
Query: 123 gcttgattactccattcaaatgtatgacagcatcacagtaaaagggtaaatatttgcttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcttgattactccattcaaatgtatgacagcatcacagtaaaagggtaaatatttgcttt 382
Query: 183 cctgcttcgaatcactgctgccactaacggttcttctacttttactcccgtcctctacaa 242
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 actgcttcgaatcactgctgccactaatggttcttctacttttactcccgtcctctacaa 442
Query: 243 ggacagatctttgttccatttagaaactgtgattttaaaggaa-aagcaatatggtttgt 301
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 443 ggacagatctttgttccatttagaaactgtgattttaaaggaagaa-caatatggtttgt 501
Query: 302 ttgcttgtttgtttgttttggtggggttgaaggataacaatctcaaagttaaaagatgct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgcttgtttgtttgttttggtggggttgaaggataacaatctcaaagttaaaagatgct 561
Query: 362 ctgtagatttcctgttaagtagagacacacagattattaattagagtacagaatgtctat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctgtagatttcctgttaagtagagacacacagattattaattagagtacagaatgtctat 621
Query: 422 aaaacttttaataaattatagacttactgtatgtgtctttctcaattgttttaattggtg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 aaaacttttaataaattatagacttactgtatgtgtctttctcaattgttttaattggtg 681
Query: 482 ttcttatagttagttgaatattccactggcagacaggaaatacagagatattatataaat 541
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 682 ttcttatagttagttgaatattccactggcagacaggaaataaagagatattatataaat 741
Query: 542 atcagtaaatactaattaaaaacacaatgtcca 574
|||||||||||||||||||||||||||||||||
Sbjct: 742 atcagtaaatactaattaaaaacacaatgtcca 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no495_h13.g1 MSMg01no495_h13.g1 CHROMAT_FILE:
MSMg01no495_h13.g1 PHD_FILE: MSMg01no495_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:33 2005
(242 letters)
>mm_chr11_38673355_38673996
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Minus
Query: 1 taagaaactacattgctgtagttggtaatcagggggctgttttcagagacgtgatttggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taagaaactacattgctgtagttggtaatcagggggctgttttcagagacgtgatttggg 383
Query: 61 acttctttattcataactatatgcaaaaatgcattatatgtgtgcttttatatgcatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acttctttattcataactatatgcaaaaatgcattatatgtgtgcttttatatgcatatc 323
Query: 121 tatagttcagttggaagatatttattaccagctttcataattgaaccactaatgaggttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatagttcagttggaagatatttattaccagctttcataattgaaccactaatgaggttg 263
Query: 181 gttgaatcacagccatgtgtctttatcagccaaaatataaatcaaaaatcttgttacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gttgaatcacagccatgtgtctttatcagccaaaatataaatcaaaaatcttgttacttt 203
Query: 241 ca 242
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
