Query= MSMg01no497_n18.b1 MSMg01no497_n18.b1 CHROMAT_FILE:
MSMg01no497_n18.b1 PHD_FILE: MSMg01no497_n18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:41 2005
(683 letters)
>mm_chr11_91701156_91702239
Length = 1084
Score = 1253 bits (648), Expect = 0.0
Identities = 672/680 (98%), Gaps = 1/680 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttatttacgtgtatgctaaagcctataaacttcatgagtgttaattgctatt 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 gaattcttttattgaagtgtatgctaaagcctataaacttcatgagtgttaattgctatt 825
Query: 65 ttatgcaaacattatcctctttcatatacacacaatacccattcataatatcaccatcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttatgcaaacattatcctctttcatatacacacaatacccattcataatatcaccatcaa 765
Query: 125 cctatgtgttttgttttcttctcattatatattgttaaagactttaatagaatataggtg 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 764 cctatgtgttttgttttcttctcattatatattattaaagactttaatagaatgtaggtg 705
Query: 185 a-ttttttttcctttaggttgaatttagatctgacttggagggggaggttagaaattgcc 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 atttttttttcctttaggttgaatttagatctgacttggagggggaggttagaaattgcc 645
Query: 244 ttggacttcggcattgacaacatttattattctaatgaaaacattaaagacggcattata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ttggacttcggcattgacaacatttattattctaatgaaaacattaaagacggcattata 585
Query: 304 attatcacattttgtatatgagaaaaacagaacttaccttaactttatcatataaacttc 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 584 attatcacattttgtatatgagcaaaacagaacttaccttaactttatcatataaacttc 525
Query: 364 cagtatttggaggacacagagaacacagaaagccaaaggaagtatgcatgtcatgataag 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cagtatttggaggacacagagaacacagaaagccaaaggaagtatgcatgtcatgataag 465
Query: 424 caatttgttttcaatgaatctgactgcattccaatctatccacacttgtaacttcttgag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 caatttgttttcaatgaatctgactgcattccaatctatccacacttgtaacttcttgag 405
Query: 484 taatcaaggctatccaaagcaaaagtcccattttcatgttagcattggaatatgttagta 543
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 404 taatcaaggctatccaaagcaaaagtcccattttcatgttagtattggaatatgttagta 345
Query: 544 gtatttgcttatataataataaactactttaatttaacttataatatcataagtgagtga 603
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gcatttgcttatataataataaactactttaatttaacttataatatcataagtgagtga 285
Query: 604 ggttaattggggttccagaacatattaagagttaaaagatttaagcaacaaaaatcttta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggttaattggggttccagaacatattaagagttaaaagatttaagcaacaaaaatcttta 225
Query: 664 actaaagcaatgaacattta 683
||||||||||||||||||||
Sbjct: 224 actaaagcaatgaacattta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1084
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1074
Effective search space: 722802
Effective search space used: 722802
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_n18.g1 MSMg01no497_n18.g1 CHROMAT_FILE:
MSMg01no497_n18.g1 PHD_FILE: MSMg01no497_n18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:42 2005
(405 letters)
>mm_chr11_91575806_91576609
Length = 804
Score = 731 bits (378), Expect = 0.0
Identities = 398/412 (96%), Gaps = 14/412 (3%)
Strand = Plus / Plus
Query: 1 taagtgtgctttactaactcaaagtttctcatcatcagagggtctcaaatactttaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 taagtgtgctttactaactcaaagtttctcatcatcagagggtctcaaatactttaactt 259
Query: 61 tcagtctatttttactttttt-------agttttgtttgtttgtttgtttttgtttttgt 113
||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 tcagtctatttttac------ccaacagagttttgtttgtttgtttgtttttgtttttgt 313
Query: 114 tttgtttgtgtttttgtttttttgttttgtttttcgtttttggctaagaaaggcttttaa 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tttgtttgtgtttttgtttttttgttttgtttttcgtttttggctaagaaaggcttttaa 373
Query: 174 actaaacactgtgctaaatatcacctgaatgaaatgtttctgctggaatttctgagtaga 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 actaaacactgtgctaaatatcacctgaatgaaatgtttctgctggaatttctgagtaga 433
Query: 234 actgaagcacaaaacagattatgtatatgggttttaaatatcttattgtgggaatgaaaa 293
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 actgaagcacaaaacagat-atgtatatgggttttaaatatcttattgtgggaatgaaaa 492
Query: 294 agagatccaaaacacatcagaatgatcatctatcatgatgaagcatgatatataatatat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agagatccaaaacacatcagaatgatcatctatcatgatgaagcatgatatataatatat 552
Query: 354 catgaatgaactgtaaggctggttccacatatgggaatcagccaatgtaatc 405
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 catgaatgaactgtaaggctggttccacatatgggaatcagccaatgtaatc 604
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 804
Length adjustment: 9
Effective length of query: 396
Effective length of database: 795
Effective search space: 314820
Effective search space used: 314820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
