Query= MSMg01no502_l17.b1 MSMg01no502_l17.b1 CHROMAT_FILE:
MSMg01no502_l17.b1 PHD_FILE: MSMg01no502_l17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:50 2005
(424 letters)
>mm_chr11_35481908_35482735
Length = 828
Score = 785 bits (406), Expect = 0.0
Identities = 421/428 (98%), Gaps = 4/428 (0%)
Strand = Plus / Plus
Query: 1 ccagacaccggctttcagaaagcgggccctgagtcactgtggcatggggggggg----ag 56
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ccagacaccggctttcagaaagcgggccctgagtcactgtggcatgggggggggggggag 260
Query: 57 ccagatagctcctcaaagcacacatttcctctcactctcccctctcagaaacctctgtgt 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagatagctcctcaaagcacacatttcctctcactctcccctctcagaaacctctgtgt 320
Query: 117 gggggatggactcacataaagaaccagacagacagggactcagccttccagctactggag 176
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggggatggactcatataaagaaccagacagacagggactcagccttccagctactggag 380
Query: 177 aggggcctgaggctcctacaggcaagagagtgggaggatacctctgggcccacagtggag 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggggcctgaggctcctacaggcaagagagtgggaggatacctctgggcccacagtggag 440
Query: 237 gctatcctggtcctacgcctcaggctcagctggcaataagcacacagccaagaaccccca 296
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctatcctggccctacgcctcaggctcagctggcaataagcacacagccaagaaccccca 500
Query: 297 gtcccatgcatagtcactgtcccagccatagacactggcagcaacagaagatgggacagg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcccatgcatagtcactgtcccagccatagacactggcagcaacagaagatgggacagg 560
Query: 357 ctcttctcaggcagatggtgagcaggtggcagtggcagtgggaaggctcccatgatcacc 416
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 ctcttctcaggcagatggtgagcaggtggcagtggcagtgggaaggctaccatgatcacc 620
Query: 417 ctggcctg 424
||||||||
Sbjct: 621 ctggcctg 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 828
Length adjustment: 9
Effective length of query: 415
Effective length of database: 819
Effective search space: 339885
Effective search space used: 339885
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_l17.g1 MSMg01no502_l17.g1 CHROMAT_FILE:
MSMg01no502_l17.g1 PHD_FILE: MSMg01no502_l17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:50 2005
(455 letters)
>mm_chr11_35674989_35675844
Length = 856
Score = 808 bits (418), Expect = 0.0
Identities = 445/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 1 aaagccagcctgggttatactgcaaatttatctttaaaagggaaggggatgggatgtata 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 aaagccagcctgggttatattgcaaatttatctttaaaagggaaggggatgggatgtata 595
Query: 61 aataggtgaggtgacgtgcacctagtcccaactccttgagtggcttaagctcaccaacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aataggtgaggtgacgtgcacctagtcccaactccttgagtggcttaagctcaccaacct 535
Query: 121 gggcaacatagtgaga-ccccattaggaagttcctcctctatctcacggagaccttattt 179
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 gggcaacatagtgagacccccattaggaagttcctcctctatctcacggagaccttattt 475
Query: 180 gccccaaacagggaagtgcccagatcagcctggccgaggtctgccggtctggggagaggt 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 gccccaaacagggaggtgcccagatcagcctggccgaggtctgccggtctggggagaggt 415
Query: 240 caacgttttggtacaatctcctgagctacaaatacttgaagaagcagtgcagggagcccc 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 caacgcgctggtacaatctcctgagctacaaatacttgaagaagcagtgcagggagcccc 355
Query: 300 agccaacagaagctccagggccagaccatgtggtaaatgagctaagtgaactgattgcgg 359
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 354 agccaacagaagctccagggccagaccatgtggtaagtgcgctaagtgaactgattgcgg 295
Query: 360 gcaacattctcacccccacccctgctgcatcccatggactggaaccaagcttacaatgtg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 294 gcaacattctcacccccacccctgctgcatcccatggactggaaccaagcttacagtgtg 235
Query: 420 ggaggaggggagcccagagtaaggggaaacggaa 453
||||||||||||||||||||||||||||||||||
Sbjct: 234 ggaggaggggagcccagagtaaggggaaacggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 856
Length adjustment: 10
Effective length of query: 445
Effective length of database: 846
Effective search space: 376470
Effective search space used: 376470
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
