Query= MSMg01no505_a18.b1 MSMg01no505_a18.b1 CHROMAT_FILE:
MSMg01no505_a18.b1 PHD_FILE: MSMg01no505_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:52 2005
(651 letters)
>mm_chr11_111972038_111973089
Length = 1052
Score = 1168 bits (604), Expect = 0.0
Identities = 639/652 (98%), Gaps = 5/652 (0%)
Strand = Plus / Plus
Query: 1 cagtgactcattcaggaatgacagtgagacctaatcctcaccaataagaacactgagcat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 cagtgactcattcaggaatgacagtgagacctaatcctcaccaataagaacattgagcat 260
Query: 61 aaaatcaaagcaaagttgattccaaaatcaagaagcctagagtttgtgtcaaca-ttttt 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 aaaatcaaagcaaagttgattccaaaatcaagaagcctagagtttgtgtcaacatttttt 320
Query: 120 tcccaaagtggtcagttgtaaggagtgtaaacgattgcatgaaatccaggaccaagatcc 179
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 ttccaaagtggtcagttgtaaggagtgtaaacgattgcatgaaacccaggaccaagatcc 380
Query: 180 aagccagaagaagcagcctctctctggggacaggtctttatgactgtatccctgggaagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagccagaagaagcagcctctctctggggacaggtctttatgactgtatccctgggaagt 440
Query: 240 gtgcctacccaggcacacgtattcctcagtgctccttgcatcccagcaggtatcggagac 299
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gtgcctacccaggcacacctattcctcagtgcttcttgcatcccagcaggtatcggagac 500
Query: 300 tatgccttagcgatgtgctatgtttaggtaaagcggggtgccatccttgaagacctgtaa 359
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 tatgccttagcgatgtgctatgtttaggtaaagcagggtgccatccttgaagacctgtaa 560
Query: 360 ctaaaatggcatacatcttcacatgtctctgcttcccatcaatagctggaagctctagga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaaaatggcatacatcttcacatgtctctgcttcccatcaatagctggaagctctagga 620
Query: 420 ccataatagagccaatggtacaaggttcgaagatagtgagcccagagacaaacatgaaag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccataatagagccaatggtacaaggttcgaagatagtgagcccagagacaaacatgaaag 680
Query: 480 atgtcctctgacaggcaccatg--acttcaaattagtacctgaaggacaaacagagttcc 537
||||||||| |||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgtcctctaacaggcac--tgcgacttcaaattagtacctgaaggacaaacagagttcc 738
Query: 538 atggcactcagcagtgtggatactgtgacttatcaaagtgtgcatatgttagactactag 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atggcactcagcagtgtggatactgtgacttatcaaagtgtgcatatgttagactactag 798
Query: 598 acacaagggaggagctggcaattcatgggagggcactaaggtggcttgatga 649
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 799 acacaagggaggagctggcaattcaggggagggcactaaggtggcttgatga 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_a18.g1 MSMg01no505_a18.g1 CHROMAT_FILE:
MSMg01no505_a18.g1 PHD_FILE: MSMg01no505_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:52 2005
(648 letters)
>mm_chr11_112118081_112119128
Length = 1048
Score = 745 bits (385), Expect = 0.0
Identities = 421/433 (97%), Gaps = 4/433 (0%)
Strand = Plus / Minus
Query: 209 tctgactatttttataaaccggtctcaaagcatgatataaataaaaagaaaattctatgt 268
|||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||
Sbjct: 547 tctgactatttttataaagcggtctcaaagcatgagaaaaataaaaagaaaattctatgt 488
Query: 269 ctggaccatcacaagtctgaaatatatttctagag-actgtgtcacacagacataatagg 327
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 487 ctggaccatcacaagtctgaaatatatttctagagca-tgtgtcacacagacataatagg 429
Query: 328 taaccagtaatctttagacattttatttctgatatagggtctcatgtatcccaggctggc 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 taaccagtaatctttagacattttatttctgatatagggtctcatgtatcccaggctggc 369
Query: 388 cttgaattacttatataaccaaggttaaccttgagttcctggtcctattgctcacacctt 447
|||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 368 cttgaattacttatataaccaaggttgcccttgagttcctgatcctattgctcacacctt 309
Query: 448 taatgttgatattacaggtggatcgcaccacgcctaatttataggatactgggaattgaa 507
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 308 taatgttgatattacaggtggattgcaccacgcctaatttataggatactgggaattgaa 249
Query: 508 cgcctttaggatgctaggcaattacactacctactgaaatgcattgtgaagtcttccatg 567
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 cgcctttaagatgctaggcaattacactacctactgaaatgcattgtgaagtcttccatg 189
Query: 568 tatttttctaatttaaaa-a-atatatatttatattctctctctctctctctctctctct 625
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 188 tatttttctaatttaaaatatatatatatttatattctctctctctctctctctctctct 129
Query: 626 ctctctctctctc 638
|||||||||||||
Sbjct: 128 ctctctctctctc 116
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
