Query= MSMg01no505_e17.b1 MSMg01no505_e17.b1 CHROMAT_FILE:
MSMg01no505_e17.b1 PHD_FILE: MSMg01no505_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:10 2005
(419 letters)
>mm_chr11_78427720_78428538
Length = 819
Score = 704 bits (364), Expect = 0.0
Identities = 403/418 (96%), Gaps = 7/418 (1%)
Strand = Plus / Plus
Query: 5 gaattctaaaa---tttctaactagggctttggtggaaagacagtagaagatttgagaca 61
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctaaaacaattt--aactagggctttggtggaaagacagtagaagatttgagaca 261
Query: 62 ggatcacatgtagtgaaggctggctttgaactggatccccttggagacagactgttgcga 121
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gggtcacatgtagtgaaggctggctttgaactggatccccttggagacagactgttgcga 321
Query: 122 gtcattcaacgtatgtactggaatctgaactcaggtcctctgaaagaggagtaagtgctc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtcattcaacgtatgtactggaatctgaactcaggtcctctgaaagaggagtaagtgctc 381
Query: 182 tcaactgctgaaccttgtctctaatccccgaacttttggttttatgatgtttgtatatta 241
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 382 tcaactgctgaaccttgtctctaatccccgaacttttggttttatgatgtttgtgtatta 441
Query: 242 aaattatgtaacacaacatcgccattttcacttataaaaagtataaccatgtggtaaaag 301
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 442 aaattatgtaacacaacatcgccattttcacttagaaaaagtataaccatgtggtaaaag 501
Query: 302 tatgtacagtggaagattacctttctcctcacaacatgggcaatacatgagtaagtgtat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tatgtacagtggaagattacctttctcctcacaacatgggcaatacatgagtaagtgtat 561
Query: 362 acatagataccggtaagggcagggggggtggggcaaa-agggggggggagggagagaa 418
|||||||||| ||| |||||||||||| || |||| | |||||||| |||||||||||
Sbjct: 562 acatagatactggtgagggcagggggg-tgaggcagagagggggggagagggagagaa 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_e17.g1 MSMg01no505_e17.g1 CHROMAT_FILE:
MSMg01no505_e17.g1 PHD_FILE: MSMg01no505_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:10 2005
(545 letters)
>mm_chr11_78590682_78591627
Length = 946
Score = 965 bits (499), Expect = 0.0
Identities = 535/547 (97%), Gaps = 3/547 (0%)
Strand = Plus / Minus
Query: 1 ctattgtcagcaagagccagaataaccacagcccccactcctgcctcagccagcacctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctattgtcagcaagagccagaataaccacagcccccactcctgcctcagccagcacctcc 687
Query: 61 attctgcagcggccacccagcctcaggctttgatcagtgagcctacagact-cagctgtc 119
||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||
Sbjct: 686 attctgcagcggccacccagcctcaggctttgaccagtgagcctacaga-tgcagctgtc 628
Query: 120 cctagtcccaggagtcacagggaggcctggataataagaccgagcaggcagggtccccag 179
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 627 cctagtcccaggagtcacagggaggcctggataataagacctagcaggcagggtccccag 568
Query: 180 cttccccactaagcactgagtttgaatcacaaaggaacctgcagtccccacctctcagtt 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 cttccccactaaacactgagtttgaatcacaaaggaacctgcagtccccacctctcagtt 508
Query: 240 gcacttgcagctcccagtggtgggagaagttaggaagagttcccacaatggacattgtta 299
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 507 gcacttgcagctcccagtggtgggagaagttaggaagaattcccacaatggacattgtta 448
Query: 300 ggtctgcaggaaaattcccaagaaccccaaaagggcaggcc-cttggtccaaaatggcag 358
|||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 447 ggtctgcaggaaaactcccaagaaccccaaaagggcaggtctcttggtccaaaatggcag 388
Query: 359 cctctgctcagctcacactggcagatcctttcaggatctcttgagaacctgtctatgagg 418
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 387 cctctgctcagctcacactggcagatcctttcaggacctcttgggaacctgtctatgagg 328
Query: 419 aagttacttccctatctccccttcctctggcagatgaggaacctggccctctattaactt 478
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 327 aagttacttccctatctccccttcctctggcagatgaggaatctggccctctattaactt 268
Query: 479 gtacctctggtgcgcaccagagccaatgccagcccgtggagtcctgtccctattcacgtg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 gtacctctggtgcgcaccagagccaatgccagcccgtggagtcctgtccctattcacgtg 208
Query: 539 tacttgt 545
|||||||
Sbjct: 207 tacttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 946
Length adjustment: 10
Effective length of query: 535
Effective length of database: 936
Effective search space: 500760
Effective search space used: 500760
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
