Query= MSMg01no505_o19.b1 MSMg01no505_o19.b1 CHROMAT_FILE:
MSMg01no505_o19.b1 PHD_FILE: MSMg01no505_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:56 2005
(651 letters)
>mm_chr11_34898082_34899132
Length = 1051
Score = 1220 bits (631), Expect = 0.0
Identities = 631/631 (100%)
Strand = Plus / Minus
Query: 21 gagctggggagactgtgctgagctacggggcattcggttaatgtctcttttgtgttctta 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gagctggggagactgtgctgagctacggggcattcggttaatgtctcttttgtgttctta 792
Query: 81 accgtctcatttcccaaccttcttccccagaggttagatcaggaagaaggtgagtcatag 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 accgtctcatttcccaaccttcttccccagaggttagatcaggaagaaggtgagtcatag 732
Query: 141 cctgcccatctatacatttatacgtttgctatttaggtatcggtctaaaaataatcacaa 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 cctgcccatctatacatttatacgtttgctatttaggtatcggtctaaaaataatcacaa 672
Query: 201 ggatcattgctccgtagttcaagacttttttccctgtggcagaatatctgtttacagctt 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ggatcattgctccgtagttcaagacttttttccctgtggcagaatatctgtttacagctt 612
Query: 261 ttcttcctctgtaaacatagtgtaaagatttgaatttattgctgagtagggtctgctcac 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttcttcctctgtaaacatagtgtaaagatttgaatttattgctgagtagggtctgctcac 552
Query: 321 atatattacttgctttatatttccccactttagagtccttttgcatctcttctaatgatg 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atatattacttgctttatatttccccactttagagtccttttgcatctcttctaatgatg 492
Query: 381 ggaataagttttgtttgcggtttgcactgctgtacctacatgtgcaaagtggttcatagc 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggaataagttttgtttgcggtttgcactgctgtacctacatgtgcaaagtggttcatagc 432
Query: 441 acatatctgcgagcatgtcttcaggctgtggtttctgttgaatcacacagtatggcatgt 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 acatatctgcgagcatgtcttcaggctgtggtttctgttgaatcacacagtatggcatgt 372
Query: 501 tcatgttctaataagcattggatggttctggtggagagctgggtgttaatagagatggca 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcatgttctaataagcattggatggttctggtggagagctgggtgttaatagagatggca 312
Query: 561 acattgtctcttaaggatttatgtcaatgctcagtttcttttgaccttacaagcatcctc 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acattgtctcttaaggatttatgtcaatgctcagtttcttttgaccttacaagcatcctc 252
Query: 621 atgtatgaagatgcaacatcttttcattatg 651
|||||||||||||||||||||||||||||||
Sbjct: 251 atgtatgaagatgcaacatcttttcattatg 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1051
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1041
Effective search space: 667281
Effective search space used: 667281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_o19.g1 MSMg01no505_o19.g1 CHROMAT_FILE:
MSMg01no505_o19.g1 PHD_FILE: MSMg01no505_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:57 2005
(600 letters)
>mm_chr11_34735487_34736485
Length = 999
Score = 1145 bits (592), Expect = 0.0
Identities = 598/600 (99%), Gaps = 1/600 (0%)
Strand = Plus / Plus
Query: 1 cctggaactgaatgaaaatgaaaacacaatatactggagtttaattttgtttaatggtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctggaactgaatgaaaatgaaaacacaatatactggagtttaattttgtttaatggtag 260
Query: 61 taagtagtagctttgggctacttcaaaagtccagaatattctcttttacatgacactgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagtagtagctttgggctacttcaaaagtccagaatattctcttttacatgacactgtt 320
Query: 121 tttgaacaaaggtacttgttaagataataagcatacaccctaactcctcttttgaaagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaacaaaggtacttgttaagataataagcatacaccctaactcctcttttgaaagtc 380
Query: 181 attatcattgcttaccgattcatttacccagatactcaacaaactttagatacacactag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatcattgcttaccgattcatttacccagatactcaacaaactttagatacacactag 440
Query: 241 acactgttatttatatgaaatccagggtaattataatcctcttcctgcattctatgattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acactgttatttatatgaaatccagggtaattataatcctcttcctgcattctatgattg 500
Query: 301 ttgttatctctgggcatgatgcatattaaataattctgcaagtaagtttttaaagtagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgttatctctgggcatgatgcatattaaataattctgcaagtaagtttttaaagtagta 560
Query: 361 caaaggaaaggcagagttgtaataagaatgtggaaacaaacaatcaacaccccccccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 caaaggaaaggcagagttgtaataagaatgtggaaacaaacaatcaacacccccccccaa 620
Query: 421 aaaaaacctagttggtgagatggatacatggctcagtgatacaccattctttttttttaa 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaa-cctagttggtgagatggatacatggctcagtgatacaccattctttttttttaa 679
Query: 481 ttaggtattttcttcatttacatttccaatgctactccaaaagtcccccataccctccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ttaggtattttcttcatttacatttccaatgctactccaaaagtcccccataccctccca 739
Query: 541 actcccctatccccccacttccacttcttggccctggcgttccctgtattgaggcatata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 actcccctatccccccacttccacttcttggccctggcgttccctgtattgaggcatata 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 999
Length adjustment: 10
Effective length of query: 590
Effective length of database: 989
Effective search space: 583510
Effective search space used: 583510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
