Query= MSMg01no508_j19.b1 MSMg01no508_j19.b1 CHROMAT_FILE:
MSMg01no508_j19.b1 PHD_FILE: MSMg01no508_j19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:34 2005
(703 letters)
>mm_chr11_33294518_33295621
Length = 1104
Score = 1195 bits (618), Expect = 0.0
Identities = 627/632 (99%), Gaps = 5/632 (0%)
Strand = Plus / Minus
Query: 2 ggaattcctaagttt---atcaatgtaggcctcaccttcatttccaacttaccaaagtta 58
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggaattcctaag--tacaatcaatgtaggcctcaccttcatttccaacttaccaaagtta 573
Query: 59 aacaaactcaagaagcttgaattaagcgaaaacagaatctcaggggacctggaagtattg 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aacaaactcaagaagcttgaattaagcgaaaacagaatctcaggggacctggaagtattg 513
Query: 119 gcagagaaatgtccgaaccttaagcatctaaatttaagtggcaacaaaataaaataaaag 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gcagagaaatgtccgaaccttaagcatctaaatttaagtggcaacaaaataaaataaaag 453
Query: 179 atctcagtacaatagagctgctgaagaagttagagaatctcaagagcctagacctgttta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atctcagtacaatagagctgctgaagaagttagagaatctcaagagcctagacctgttta 393
Query: 239 actgttttctgtctcaaaattaacaagaatatttttaatgggcatggaagtggaggaatc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 actgttttctgtctcaaaattaacaagaatatttttaatgggcatggaagtggaggaatc 333
Query: 299 caaaaagaagtgagaaaaaaagtatatatgttagatgttctgtgtggggcaggtttcact 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 caaaaagaagtgagaaaaaaagtatatatgttagatgttctgtgtggggcaggtttcact 273
Query: 359 gtgcaaagattgaccttcagcatgtgaccggactttcatggagatgtccttttaattact 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gtgcaaagattgaccttcagcatgtgaccggactttcatggagatgtccttttaattact 213
Query: 419 ttgttactaactcttttaaggatttattatctttaattgttcacatgtatgtaggtatat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ttgttactaactcttttaaggatttattatctttaattgttcacatgtatgtaggtatat 153
Query: 479 gtcagagatcccctggaagtggaattataggcagttgtgagccaacagaggagagtgtgg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 gtcagagatcccctggaagtggaattataggcagttgtgagccaacagaggagagtgtgg 93
Query: 539 attaccaatgtgtgtttttaaccactaagccatttctccagcccctgctagtaagtcttc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 attaccaatgtgtgtttttaaccactaagccatttctccagcccctgctagtaagtcttc 33
Query: 599 tcaggtaaatgtataaactgaaacatcctttg 630
||||||||||||||||||||||||||||||||
Sbjct: 32 tcaggtaaatgtataaactgaaacatcctttg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 703
Length of database: 1104
Length adjustment: 10
Effective length of query: 693
Effective length of database: 1094
Effective search space: 758142
Effective search space used: 758142
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no508_j19.g1 MSMg01no508_j19.g1 CHROMAT_FILE:
MSMg01no508_j19.g1 PHD_FILE: MSMg01no508_j19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:34 2005
(582 letters)
>mm_chr11_33148386_33149367
Length = 982
Score = 1079 bits (558), Expect = 0.0
Identities = 576/582 (98%)
Strand = Plus / Plus
Query: 1 tgggatagagccaggcatggaagatttctccaggaagctgtgacaagatggacacatgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggatagagccaggcatggaagatttctccaggaagctgtgacaagatggacacatgac 260
Query: 61 acctgaacaaaggtaaccagccatggggcagaatgtgggttaaaataaatgagatatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctgaacaaaggtaaccagccatggggcagaatgtgggttaaaataaatgagatatttt 320
Query: 121 aagttatcatctagttagagaagagcctagctatatgaccaaggtatttataaatacatt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aagttatcatctagttagagaagagcctagctatatgaccaagatatttataaatacatt 380
Query: 181 ttgagtctgagtcttatttcttggagcatggggctggaaggaagaaccaagcttaacttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgagtctgagtcttatttcttggagcatggggctggaaggaagaaccaagcttaacttc 440
Query: 241 tacaaagaattttgggaaagactcttagagacaattttttgagccatactatactcacct 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacaaagaaaaatgggaaagactcttagagacaattttttgagccatactatactcacct 500
Query: 301 atatactgaaaatattacctaactcttttagtaagtacttagcaagtgctttctgtaccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatactgaaaatattacctaactcttttagtaagtacttagcaagtgctttctgtaccg 560
Query: 361 tgcctgggaataaaggaatggttgagaatgcctgctcttttattggccaaaagggtccag 420
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcctgggaataaagaaatggttgagaatgcctgctcttttattggccaaaagggtccag 620
Query: 421 cagacacctttcccgcaaatattcttgagtattcctaatgctattggttcgatgctacag 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagacacctttcccgaaaatattcttgagtattcctaatgctattggttcgatgctacag 680
Query: 481 cttgatggtaagactattgctaaagataccacatacatatggcatagaactaagaaatct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgatggtaagactattgctaaagataccacatacatatggcatagaactaagaaatct 740
Query: 541 agctggggtttaactgaaagctttatccctactggctagtgg 582
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agctggggtttaactgaaagctttatccctactggctagtgg 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
