Query= MSMg01no510_g06.b1 MSMg01no510_g06.b1 CHROMAT_FILE:
MSMg01no510_g06.b1 PHD_FILE: MSMg01no510_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(656 letters)
>mm_chr11_67659795_67660850
Length = 1056
Score = 1210 bits (626), Expect = 0.0
Identities = 641/646 (99%)
Strand = Plus / Plus
Query: 1 gaaagcctccaacaaatgctgctgaggatgtggacagaaagaaacccctatctattaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaaagcctccaacaaatgctgctgaggatgtggacagaaagaaacccctatctattaaca 260
Query: 61 ctgaggacaggaagtagtatagccactacagacccagcatggaggttttctcaaaagact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgaggacaggaagtagtatagccactacagacccagcatggaggttttctcaaaagact 320
Query: 121 gatagcatcatcaattgtttcgggaaatgcatcacgcactaccactagctactttctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatagcatcatcaattgtttcgggaaatgcatcacgcactaccactagctactttctggc 380
Query: 181 ctcaatctattattattattttatatgaatcagctataccaatcctggttatttacctga 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcaatctattattatttttttatatgaatcagctataccaatcctggttatttacctga 440
Query: 241 atatctcctaatcatcacattacacgtacacgtgtacatcagtgtatactgaagctctat 300
| | |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 agaactccaaatcatcacattacaggtacacgtgtacatcagtgtatactgaagctctat 500
Query: 301 tcacaactatttctcccattctctgtcttcctcagttgcctctaggtctttgtctagggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcacaactatttctcccattctctgtcttcctcagttgcctctaggtctttgtctagggt 560
Query: 361 ggggaccctatgagattcgccccttctctgttagcatgtttattgctactgtccttgttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggaccctatgagattcgccccttctctgttagcatgtttattgctactgtccttgttc 620
Query: 421 aggtttattgattaggaagctgtattggtgggatttcatgagtgtgtagcttccttggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggtttattgattaggaagctgtattggtgggatttcatgagtgtgtagcttccttggca 680
Query: 481 tctctaggagaggcagtctcacagcagactttctgttcccttagcttttaaagaactttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctctaggagaggcagtctcacagcagactttctgttcccttagcttttaaagaactttt 740
Query: 541 tatgccaggccaggcggtaatggcacacgcctttaatcccagccctcaggagacagaggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tatgccaggccaggcggtaatggcacacgcctttaatcccagccctcaggagacagaggc 800
Query: 601 agccttctctctgagcttgaggctagcctggactacagagtgagtt 646
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agccttctctctgagcttgaggctagcctggactacagagtgagtt 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_g06.g1 MSMg01no510_g06.g1 CHROMAT_FILE:
MSMg01no510_g06.g1 PHD_FILE: MSMg01no510_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:58 2005
(322 letters)
>mm_chr11_67801137_67801855
Length = 719
Score = 499 bits (258), Expect = e-145
Identities = 314/350 (89%), Gaps = 31/350 (8%)
Strand = Plus / Minus
Query: 1 aaatgcaggtgagttaggctagtgatcttacatg----------------atga--a--- 39
|||||||||||||||||||||||||||||||||| |||| |
Sbjct: 589 aaatgcaggtgagttaggctagtgatcttacatgatcttcatgatcttacatgatcatct 530
Query: 40 -aca------tccagaactcatgcatcattacttcagtttattctcggtctggtttctct 92
||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 529 tacatgatcttccagaactcatg---cattacttcagtttattctcggtctggtttctct 473
Query: 93 gtccccaagtcaccccaaccatttaccaacaaactgatatgtagctgttttgggtgcagg 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gtccccaagtcaccccaaccatttaccaacaaactgatatgtagctgttttgggtgcagg 413
Query: 153 tagatcaacctttaacacacaggaccagtgggaggcagccctagtgacagcaaagagaca 212
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tggatcaacctttaacacacaggaccagtgggaggcagccctagtgacagcaaagagacg 353
Query: 213 gtcctcaggcctccaactgaaaccatgactgtcttttgctctgaacctgccaagtttcct 272
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 352 gtcctcaggcctccaactgaaaccacgactgccttttgctctgaacctgccaagtttcct 293
Query: 273 aaaattctcccatccagtcattggctttggtttaaatcctaggacctgag 322
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 292 aaaattctcccatccagtcactggctttggtttaaatcctaggacctgag 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 719
Length adjustment: 9
Effective length of query: 313
Effective length of database: 710
Effective search space: 222230
Effective search space used: 222230
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
