Query= MSMg01no511_e08.b1 MSMg01no511_e08.b1 CHROMAT_FILE:
MSMg01no511_e08.b1 PHD_FILE: MSMg01no511_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:05 2005
(468 letters)
>mm_chr11_118009133_118009999
Length = 867
Score = 843 bits (436), Expect = 0.0
Identities = 457/464 (98%), Gaps = 1/464 (0%)
Strand = Plus / Plus
Query: 4 ggaattctggggacttttgagagagtatataaatgctagggccgggaggggtggggctgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctggggacttttgagagagtatataaatgctagggccgggaggggtggggctgt 263
Query: 64 tgttgcttagctgccactggtggtttgttaagtagtcatgtgcaaagaagaaagaagaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgttgcttagctgccactggtggtttgttaagtagtcatgtgcaaagaagaaagaagaag 323
Query: 124 atattagatatcctgctggtgaagatcaaacgtcccccaaggaactcagtgtccctagtc 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaattagatatcctgctggtgaagatcaaacgtcccccaaggaactcagtgtccctagtc 383
Query: 184 agcaagaagtagtcatcctctagcctttattctctcctctctagtgttagctagctgaaa 243
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 384 agcaagaagtagtcatcctctagcctttattctctcctctctagtgttagggagctgaaa 443
Query: 244 gcgtgggaaagagtgtagagaagaacccacaaaatagtgaaaagtccacctgcaggcaag 303
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcgtgggaaagagggtagagaagaacccacaaaatagtgaaaagtccacctgcaggcaag 503
Query: 304 tccacctgcaggccagactccccgctgagaccccacccccccacccccccctgcatcaca 363
|||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 504 tccacctgcaggccagactccccgatgagactccacccccccaccccccc-tgcatcaca 562
Query: 364 aaggcagagatgcctctgatttagcaacagtagcaaacacatttcacaatttcacaatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaggcagagatgcctctgatttagcaacagtagcaaacacatttcacaatttcacaatgt 622
Query: 424 atcttgcctaatgttcttaggcctatctggccttttcctgtttg 467
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atcttgcctaatgttcttaggcctatctggccttttcctgtttg 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 867
Length adjustment: 10
Effective length of query: 458
Effective length of database: 857
Effective search space: 392506
Effective search space used: 392506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_e08.g1 MSMg01no511_e08.g1 CHROMAT_FILE:
MSMg01no511_e08.g1 PHD_FILE: MSMg01no511_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:05 2005
(524 letters)
>mm_chr11_118152330_118153253
Length = 924
Score = 791 bits (409), Expect = 0.0
Identities = 442/453 (97%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 72 acctaggtcttatgccaggtgccagctcccacacaggaagcatgctaaaacagtgaattc 131
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 479 acctaggtcttatgccaggtgccagctcccacacaggaagcgtgctaaaacagtgaattt 420
Query: 132 cccaggaactgtatcaagctcgggacagcaaaagcagtaattcattgtagccagcctaga 191
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cccaggaactgtatcaggctcgggacagcaaaagcagtaattcattgtagccagcctaga 360
Query: 192 acagtgggtttatagagccagctccagccagacacaaagagtggtcagagaacaaagaag 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 acagtgggtttatagagccagctccagccagacacaaagagtggtcagagaacaaagaag 300
Query: 252 tcggactaaataaagagggaggattctgggactggaactcaataattaatagcccctact 311
|||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 299 tcggtctaaataaagagggaggattctgggactggaactcaatagttaatagcccctact 240
Query: 312 tctcttacagagtaccagagtttggttcccagccctcacactgggagctcacaacttaga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tctcttacagagtaccagagtttggttcccagccctcacactgggagctcacaacttaga 180
Query: 372 gctgcctgtgattccagttctaagagaggatgagacaccagcggtctccacaggcaccta 431
||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 179 gctgcctgtaattccagttctaagagaggatgagacaccagtggcctccacaggcaccta 120
Query: 432 cactcagatattcttcccctatacgtatgtaattcaaaatctttttaaaactaagagaac 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cactcagatattcttcccctatacgtatgtaattcaaaatctttttaaaactaagagaac 60
Query: 492 ttttttttttctaatttacgtcataagtgtctg 524
||||||||||||||||| |||||| |||||||
Sbjct: 59 -tttttttttctaatttaggtcatatgtgtctg 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
