NACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCACTATATGTACCAGGCTTTGAACCCACAGAGATACCCCTGTCTC
TGCTTCTGCCTCCCTGAGTGCAGGGACTAAAGGTGTGTGCCACCATGCCT
AGTCCTGATGCTTCTCATACATAGCAATACCGGTTGTGTTGGACATCTCT
GTTGTACAAAGGAGAGGGAGAATTATATTTTCTGTTGTCTCGATTGCCAT
TTCTTTAGTGGCTTGGCCATGTCGCACGCCTTTTTGTTTGTTTGTCATCT
GTAATCTTAGTGAAGTCCCTGCTCATCTCTGCCCACTTCTCAGTGGGGTT
GTTATTTCCTATAGTTGGCTTTTAAAGGGTTCCTTATTATTATATGTTTT
GCAAATGTTTTCCCCAAGCCTACAGTTTATCTTTTCATTCTCTTAGTAAT
ACCTTCAATTTTTTTACTTAAAAATTATGTATATGGGTGTTTTGCCTGTA
GATGTGACTGCACACCACATGCATACAGTTCCACAGAGGACAGAAGAGGG
CTTCAGAACCCGTGGGACTGTAGTTTCAGATGGTTGTGAGCAGCTCTATG
GGTGCTGGGATCAAACCCTGATCCCAGCAAGTGCTCTTAACCCCTGATCC
ACCTCTCCAGCCCTTACTGGTGTCAGTTACTTTATGTTTTTTATTTATTT
TGTGTGNATATGTATACAGCCATAGGGTGGTATACATTGTTAGTATG

ACATTGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXGTCATAGATGACAGCACCCTCGAGAA
CATGGCTGACTTCCATTAGAATTGTGAATTTTAAATCATCTTCACATCAT
GACTATTGCCCTTTGAGTTTTCCTCTGACCACCCACTGAAGATGGGAATG
CGGGGCTGGGAAGGCCATGGGTTGCCATGGAAGCAGGAGGACCACAGTTG
GGATCTCACATAACAGTGCTCAGTGGCTGCAGCTGCTCCCCTATAATTCC
AGCTTCAGAAGGTGGAAGATAGACTTAGAGACAGAGAAATCTGGCTCGTC
AACCTAGCCGAACAGGCAAGCTCTGGGGTTGATTGAGAAAGTGTGTCTCA
ATGAAAGGGGAAGAGCTCTGAGGATGGTTCCAGTCATCAACTTGGGGCTT
CCATGTGGGTGTCCACATGCACATGCATGCATACCCACATACTTGTATGC
CCATACATATTCAAACATACATACATGCATACAACACACACACACAAACG
GGGGACACAGGATCCCCCTCAAAGAGATGGCACCATTCCCAGTGTATGGG
CTGCTCATAGCCAGTCTCAGGTCATGTACTGGTGTCATGGCTGCCAACAA
GATAGGATGTATAGTTGTGGCCAGGCAATAGTTTGTAGCCATGACTCANA
ATGTATTATAAAGTCAGATCTTTATGAAGCTGAGCATATCTTGTTCAATG
TACAGATTCANGTACN

Query= MSMg01no518_n13.g1 MSMg01no518_n13.g1 CHROMAT_FILE:
MSMg01no518_n13.g1 PHD_FILE: MSMg01no518_n13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:23 2005
         (679 letters)



>mm_chr11_46053789_46054867
          Length = 1079

 Score = 1245 bits (644), Expect = 0.0
 Identities = 670/679 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtcatagatgacagcaccctcgagaacatggctgacttccattagaattgtgaattttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcatagatgacagcaccctcgagaacatggctgacttccattagaattgtgaattttaa 260

                                                                       
Query: 61  atcatcttcacatcatgactattgccctttgagttttcctctgaccacccactgaagatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcatcttcacatcatgactattgccctttgagttttcctctgaccacccactgaagatg 320

                                                                       
Query: 121 ggaatgcggggctgggaaggccatgggttgccatggaagcaggaggaccacagttgggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaatgcggggctgggaaggccatgggttgccatggaagcaggaggaccacagttgggat 380

                                                                       
Query: 181 ctcacataacagtgctcagtggctgcagctgctcccctataattccagcttcagaaggtg 240
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcacgtaacagtgctcagtggctgcagctgctcccctataattccagcttcagaaggtg 440

                                                                       
Query: 241 gaagatagacttagagacagagaaatctggctcgtcaacctagccgaacaggcaagctct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagatagacttagagacagagaaatctggctcgtcaacctagccgaacaggcaagctct 500

                                                                       
Query: 301 ggggttgattgagaaagtgtgtctcaatgaaaggggaagagctctgaggatggttccagt 360
            ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggttgattgagaaagtctgtctcaatgaaaggggaagagctctgaggatggttccagt 560

                                                                       
Query: 361 catcaacttggggcttccatgtgggtgtccacatgcacatgcatgcatacccacatactt 420
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 catcaacttggggcttccatgtgggtgtccacatgcacatgcatgcacacccacatactt 620

                                                                       
Query: 421 gtatgcccatacatattcaaacatacatacatgcatacaacacacacacacaaacggggg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 621 gtatgcccatacatattcaaacatacatacatgcatacaacacacacacacaaacgggga 680

                                                                       
Query: 481 acacaggatccccctcaaagagatggcaccattcccagtgtatgggctgctcatagccag 540
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 acacaggatccccctcaaagagatggcaccattcccagtgcatgggctgctcatagccag 740

                                                                       
Query: 541 tctcaggtcatgtactggtgtcatggctgccaacaagataggatgtatagttgtggccag 600
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcttaggtcatgtactggtgtcatggctgccaacaagataggatgtatagttgtggccag 800

                                                                       
Query: 601 gcaatagtttgtagccatgactcanaatgtattataaagtcagatctttatgaagctgag 660
           |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 801 gcaatagtttgtagccatgactcaaaatgtactataaagtcagatctttatgaagctgag 860

                              
Query: 661 catatcttgttcaatgtac 679
           |||||||||||||||||||
Sbjct: 861 catatcttgttcaatgtac 879


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space:   715161
Effective search space used:   715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)