Query= MSMg01no519_h12.b1 MSMg01no519_h12.b1 CHROMAT_FILE:
MSMg01no519_h12.b1 PHD_FILE: MSMg01no519_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:11 2005
(561 letters)
>mm_chr11_80794100_80795056
Length = 957
Score = 555 bits (287), Expect = e-162
Identities = 320/333 (96%), Gaps = 4/333 (1%)
Strand = Plus / Minus
Query: 228 ccacttcctctgtgttccctgtctgggaacctaaaagtcccgcctctgtctccttgccca 287
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 957 ccacttcctctgtgttccctgtctgggaacctaaaagtcccacctctgtctccttgccca 898
Query: 288 gccattggtcaccagcaactttatttaccaatcaaagtcaactggaggcagagaccctca 347
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gccattggtcaccggcaactttatttaccaatcaaagtcaactggaggcagagaccctca 838
Query: 348 gcgtgttccctgtggatgtgtgggttcctataatcttgggaaccgaattaacacaagtaa 407
|| |||||||||||||||||||||||| | |||||||||||||| |||||||||||||||
Sbjct: 837 gcctgttccctgtggatgtgtgggttcttgtaatcttgggaaccaaattaacacaagtaa 778
Query: 408 cattacaaccgatctacaacagacaggtctgccatcttgtgatactttcttctacaaagt 467
||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 777 cattacaacagatctacaacagacaggcctgccatcttgtgatactt----ctacaaagt 722
Query: 468 gctgagtaccttcctgtgcgatctttagctttgggttagcttagctctagctctctgaat 527
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 721 gctgagtaccttcctgtgcgatctttagcttagggttagcttagctctagctctctgaat 662
Query: 528 accagaaaggccctggctgcacttcagtctcag 560
|||||||||||||||||||||||||||||||||
Sbjct: 661 accagaaaggccctggctgcacttcagtctcag 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 957
Length adjustment: 10
Effective length of query: 551
Effective length of database: 947
Effective search space: 521797
Effective search space used: 521797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_h12.g1 MSMg01no519_h12.g1 CHROMAT_FILE:
MSMg01no519_h12.g1 PHD_FILE: MSMg01no519_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:11 2005
(616 letters)
>mm_chr11_80618815_80619830
Length = 1016
Score = 1176 bits (608), Expect = 0.0
Identities = 614/616 (99%)
Strand = Plus / Plus
Query: 1 tgtttacctgaaaggggttcctagaagattaaggacgcccctcaggctactgaaggcagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtttacctgaaaggggttcctagaagattaaggacgcccctcaggctactgaaggcagt 260
Query: 61 agtgtggagctgtgactctgtccctagcaccacttaataccctttccctctccacaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgtggagctgtgactctgtccctagcaccacttaataccctttccctctccacaattc 320
Query: 121 ctggctaccattattttactttttatgtaatagacgttgttatgttttggattttgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggctaccattattttactttttatgtaatagacgttgttatgttttggattttgtttt 380
Query: 181 aggaaggtttctctagagggacagagtcaaggagatgaaaatttatatatatgtgaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaggtttctctagagggacagagtcaaggagatgaaaatttatatatatgtgaactt 440
Query: 241 tattaagtcagtttaaaataataccaagagccaaatcacacccgagaagctgagaatcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattaagtcagtttaaaataataccaagagccaaatcacacccgagaagctgagaatcat 500
Query: 301 gtagttacatggtccttgaggccgaacgcttcaacagttagggtagtcctacactggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtagttacatggtccttgaggccgaacgcttcaacagttagggtagtcctacactggctt 560
Query: 361 tctcattgggtttgacaactggtaaatcttttagtccataaagtaggggacctcaggagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctcattgggtttgacaactggtaaatcttttagtccataaagtaggggacctcaggagt 620
Query: 421 tccaatctggcattggaggtccagaattttcctggagagctgagagctacttgttcctag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccaatctggcattggaggtccagaattttcctggagagctgagagctacttgttcctag 680
Query: 481 tccatgaggaaagttcagaaacagttctgctattaatgaagaaattatcatcatcatcat 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 681 tccatgaggaaagttcagaaacagttctgctattaatgaaggaattatcatcatcatcat 740
Query: 541 caccaccaccaccatcagcatcatcatcatcagcatcagcagcagcaggacaaatcaagt 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 741 caccaccaccaccatcagcatcatcatcatcatcatcagcagcagcaggacaaatcaagt 800
Query: 601 ctgagatatgaggaaa 616
||||||||||||||||
Sbjct: 801 ctgagatatgaggaaa 816
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
