NNNACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTAA
GATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGAC
AGCAGATGCTGGCGATGATGTGGAAAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCC
TCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGC
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCAC
AAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAA
ACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTC
AAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTG

NNNTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTAGTACATAGTACTATA
GGGAAAGACAACACATAGAAAAGGAAGCCTGGCTAAGATACAAAACCAGC
AACAGTTTGCTTCGCTGCCATTTTGCAAACTACCAAATCTTTTCAATAGA
CAGAAAAGTACAGATGGGAGTGAATCTTTTATACTATCTACACTAAGTAA
ATGGTGATTTTTTTTTCTTCAAATTTTCATTCCTCTGTGGGCATGAGGTT
TTTTGTCTTTTCTGGTTCTTCTTATATTTATCCACTCTTTTTTGTTGTTG
TACTATGTTTTTGTCAACTGATTTCTATTTTCACATCTTAAATATGTAAA
CTTTCAGGAATACATCCCTTTTCTGAAGCCGCTTCATGGGAACCTGCAAA
CTCCTTTCCAAACCTTGCAGATGCTACAGTGTTCTTGCCCTTTAGCTGGT
ATTAAGAGCTCATCTGCTAAAAAGTGGGCAGTTTTGTAGCCCAAATGCCA
TGATTACCTCAGCAAACAGTTCACGCAGTGGTGTTTTGGGTAGAGTACTA
ATTAGCTTCTGTGGCTAATGAGCTTGTCACTTGTAAATCTATTCATTATT
ATGAACGATAGAGCTGGTGTTAGAAATGTGCTAGTGTTGCACTAAGACAT
AATTATTTATGAAAAGGCCTTGCCCCAGAAATGGAAATCATAATAATT

Query= MSMg01no521_d04.g1 MSMg01no521_d04.g1 CHROMAT_FILE:
MSMg01no521_d04.g1 PHD_FILE: MSMg01no521_d04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:27 2005
         (668 letters)



>mm_chr11_41074253_41075321
          Length = 1069

 Score = 1278 bits (661), Expect = 0.0
 Identities = 667/669 (99%), Gaps = 1/669 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttagtacatagtactatagggaaagacaacacatagaaaaggaagcctggctaagata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttagtacatagtactatagggaaagacaacacatagaaaaggaagcctggctaagata 260

                                                                       
Query: 61  caaaaccagcaacagtttgcttcgctgccattttgcaaactaccaaatcttttcaataga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaccagcaacagtttgcttcgctgccattttgcaaactaccaaatcttttcaataga 320

                                                                       
Query: 121 cagaaaagtacagatgggagtgaatcttttatactatctacactaagtaaatggtgattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaaaagtacagatgggagtgaatcttttatactatctacactaagtaaatggtgattt 380

                                                                       
Query: 181 ttttttcttcaaattttcattcctctgtgggcatgaggttttttgtcttttctggttctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttcttcaaattttcattcctctgtgggcatgaggttttttgtcttttctggttctt 440

                                                                       
Query: 241 cttatatttatccactcttttttgttgttgtactatgtttttgtcaactgatttctattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttatatttatccactcttttttgttgttgtactatgtttttgtcaactgatttctattt 500

                                                                       
Query: 301 tcacatcttaaatatgtaaactttcaggaatacatcccttttctgaagccgcttcatggg 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcacgtcttaaatatgtaaactttcaggaatacatcccttttctgaagccgcttcatggg 560

                                                                       
Query: 361 aacctgcaaactcctttccaaaccttgcagatgctacagtgttcttgccctttagctgg- 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 561 aacctgcaaactcctttccaaaccttgcagatgctacagtgttcttgccctttagctggg 620

                                                                       
Query: 420 tattaagagctcatctgctaaaaagtgggcagttttgtagcccaaatgccatgattacct 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tattaagagctcatctgctaaaaagtgggcagttttgtagcccaaatgccatgattacct 680

                                                                       
Query: 480 cagcaaacagttcacgcagtggtgttttgggtagagtactaattagcttctgtggctaat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagcaaacagttcacgcagtggtgttttgggtagagtactaattagcttctgtggctaat 740

                                                                       
Query: 540 gagcttgtcacttgtaaatctattcattattatgaacgatagagctggtgttagaaatgt 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gagcttgtcacttgtaaatctattcattattatgaacgatagagctggtgttagaaatgt 800

                                                                       
Query: 600 gctagtgttgcactaagacataattatttatgaaaaggccttgccccagaaatggaaatc 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gctagtgttgcactaagacataattatttatgaaaaggccttgccccagaaatggaaatc 860

                    
Query: 660 ataataatt 668
           |||||||||
Sbjct: 861 ataataatt 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1069
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1059
Effective search space:   696822
Effective search space used:   696822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)