Query= MSMg01no521_m04.b1 MSMg01no521_m04.b1 CHROMAT_FILE:
MSMg01no521_m04.b1 PHD_FILE: MSMg01no521_m04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:11 2005
(625 letters)
>mm_chr11_30375467_30376490
Length = 1024
Score = 1187 bits (614), Expect = 0.0
Identities = 620/622 (99%), Gaps = 1/622 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctttttggccaggctgaccctgaactcagagatttgtcttcctgtacctc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctttttggccaggctgaccctgaactcagagatttgtcttcctgtacctc 263
Query: 64 ccaagtgctgggatttaaggtgtaccatcactggctggccaagatgttacatttcttaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaagtgctgggatttaaggtgtaccatcactggctggccaagatgttacatttcttaaa 323
Query: 124 aactgaacttcctgggtaaattagatcagttcttgcacaatggtcttctgtgtatacatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aactgaacttcctgggtaaattagatcagttcttgcacaatggtcttctgtgtatacatg 383
Query: 184 tgataggcatgtaggtaaataaagaataaaatcttttatgaatttcccagaaatgaaact 243
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 tgataggcatgtaggtaaataaagaataaaatcttttatgaatttcctagaaatgaaact 443
Query: 244 accatgcgtgggtcactgaggacgtaattggtagtttggaaagtcatcacattgaggaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accatgcgtgggtcactgaggacgtaattggtagtttggaaagtcatcacattgaggaaa 503
Query: 304 gaaacttgcatttataaacttggatggttctagatacttctatgattccctgactcaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaacttgcatttataaacttggatggttctagatacttctatgattccctgactcaaaa 563
Query: 364 ttcatttaaaaataatactaactacaattacttatacacaatccataaataacccaaaga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttcatttaaaaataatactaactacaattacttatacacaatccataaataacccaaaga 623
Query: 424 caaaggaaaagctggtctctgatggacagaactgtgaaaggccattgggaggcaggggta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaaggaaaagctggtctctgatggacagaactgtgaaaggccattgggaggcaggggta 683
Query: 484 aatagagtgctgttgtacagattgcctgaaagaatgactatatctgacctctttgaggga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aatagagtgctgttgtacagattgcctgaaagaatgactatatctgacctctttgaggga 743
Query: 544 gggattgtgtaaatgaatcctactatgaatgttatcatcctcaaaaaggctgggttcact 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gggattgtgtaaatgaatcctactatgaatgttatcatcctcaaaaaggctgggttcact 803
Query: 604 gaagttctttttttttttgaga 625
|||||| |||||||||||||||
Sbjct: 804 gaagtt-tttttttttttgaga 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space: 623610
Effective search space used: 623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no521_m04.g1 MSMg01no521_m04.g1 CHROMAT_FILE:
MSMg01no521_m04.g1 PHD_FILE: MSMg01no521_m04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:11 2005
(465 letters)
>mm_chr11_30550146_30551010
Length = 865
Score = 891 bits (461), Expect = 0.0
Identities = 464/465 (99%)
Strand = Plus / Minus
Query: 1 tacatctttgtctgaaggtaactaagaggtgacaggattccatactgggcataacttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tacatctttgtctgaaggtaactaagaggtgacaggattccatactgggcataacttgag 647
Query: 61 cataggagacctcaaagccctgcctctacagggacacactttctccactaaggccatatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 cataggagacctcaaagccctgcctctacagggacacactttctccactaaggccatatc 587
Query: 121 tcctcataatgccacttcccatgggcccaagtattcaaacacagtctgtatgggcaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tcctcataatgccacttcccatgggcccaagtattcaaacacagtctgtatgggcaacaa 527
Query: 181 agctagccaaatcaccacaaggcacctttcagattcatcagcctgaatgaaaagatcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 agctagccaaatcaccacaaggcacctttcagattcatcagcctgaatgaaaagatcaag 467
Query: 241 cctaactttatctcagaatcaccacagatttggcaccgtcagaacatttcataattgatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 466 cctaactttatctcagaatcaccacagatttggcaccgtcagaacatttcagaattgatt 407
Query: 301 cattgtctgtcttagttaaggtttttattgctgccatgaaacacaatgaccaaaaagcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 cattgtctgtcttagttaaggtttttattgctgccatgaaacacaatgaccaaaaagcag 347
Query: 361 cttgggggaggaaaatgtttatttggcttatacctccacagcactgtacatatcaggata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttgggggaggaaaatgtttatttggcttatacctccacagcactgtacatatcaggata 287
Query: 421 gggactcaaacaaggcaggaacctagagatgatgtagaggcatgg 465
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 gggactcaaacaaggcaggaacctagagatgatgtagaggcatgg 242
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
